RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 VKORC1L1Q8N0U8 176 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 Q8N6K4 173 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 ST6GAL2Q96JF0 529 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 FYTTD1Q96QD9 318 aaKnown RBP11.51□□□□□ -0.57
SHOX2-206ENST00000554685 NEURL2Q9BR09 285 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 RANGRFQ9HD47 186 aaPredicted RBP11.51□□□□□ -0.57
SHOX2-206ENST00000554685 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 ABCA1O95477 2261 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
SHOX2-206ENST00000554685 H3BUX3 64 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 PITX3O75364 302 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 MED6O75586 246 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 RLN2P04090 185 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
SHOX2-206ENST00000554685 MAS1LP35410 378 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 NKX2-1P43699 371 aaPredicted RBP11.5□□□□□ -0.57
SHOX2-206ENST00000554685 RELBQ01201 579 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 HNF4GQ14541 408 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 PRDM13Q9H4Q3 707 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 METTL1Q9UBP6 276 aaKnown RBP11.5□□□□□ -0.57
SHOX2-206ENST00000554685 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
SHOX2-206ENST00000554685 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
SHOX2-206ENST00000554685 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 FLNAP21333 2647 aaKnown RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 C15orf61A6NNL5 157 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 WRBO00258 174 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 ACTL6BO94805 426 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 OR2F2O95006 317 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 LY86O95711 162 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 SCGB1D2O95969 90 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 OR9G9P0C7N8 305 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 CD24P25063 80 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 PSMB6P28072 239 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 RPL8P62917 257 aaKnown RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 RBMS3Q6XE24 437 aaKnown RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 Q6YL49 198 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 Q6ZRM9 215 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 PPP1R27Q86WC6 154 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 OR5B3Q8NH48 314 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 PPP1R1CQ8WVI7 109 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 SSMEM1Q8WWF3 244 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 PPP1R14BQ96C90 147 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 RBM14Q96PK6 669 aaKnown RBP11.49□□□□□ -0.57
SHOX2-206ENST00000554685 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 ZNF257Q9Y2Q1 563 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
SHOX2-206ENST00000554685 M0QZK8 103 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 FGF16O43320 207 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 CRYGBP07316 175 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 PVALBP20472 110 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-206ENST00000554685 S100A10P60903 97 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 SPCS3P61009 180 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 ID3Q02535 119 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 IL15RAQ13261 267 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 IZUMO4Q1ZYL8 232 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 C5orf64Q2M2E5 130 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 THAP6Q8TBB0 222 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 PIFOQ8TCI5 191 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 C22orf15Q8WYQ4 148 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 RITA1Q96K30 269 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 CLCC1Q96S66 551 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 SLC25A33Q9BSK2 321 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 FBXL15Q9H469 300 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 HSPB7Q9UBY9 170 aa11.48□□□□□ -0.57
SHOX2-206ENST00000554685 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 A6NDX4 124 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 MPC2O95563 127 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 IFNA17P01571 189 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 MBPP02686 304 aaPredicted RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 SRD5A1P18405 259 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 CNTFRP26992 372 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 IER3P46695 156 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 F2RL1P55085 397 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 OR2B8PP59922 312 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 HSPE1P61604 102 aaKnown RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 TNFRSF9Q07011 255 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 RAB32Q13637 225 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 PRSS8Q16651 343 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 LRRC37A5PQ49AS3 106 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 CIB3Q96Q77 187 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms