RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 DAZ1Q9NQZ3 744 aaKnown RBP10.36□□□□□ -0.75
VPS29-209ENST00000551655 SLC2A9Q9NRM0 540 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 TRBV5-7A0A0A0MS05 114 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 IGHV3-49A0A0A0MS15 119 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 TRBV6-6A0A0A6YYG2 114 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 CRYGCP07315 174 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 RRASP10301 218 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 RPL27AP46776 148 aaKnown RBP10.35□□□□□ -0.75
VPS29-209ENST00000551655 UNC119Q13432 240 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 Q499Y3 187 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 OR2B11Q5JQS5 317 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 CENPSQ8N2Z9 138 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 SMIM19Q96E16 107 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 MYCBPQ99417 103 aaPredicted RBP10.35□□□□□ -0.75
VPS29-209ENST00000551655 ZNF446Q9NWS9 450 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 POMPQ9Y244 141 aa10.35□□□□□ -0.75
VPS29-209ENST00000551655 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 SAC3D1A6NKF1 404 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 RAB27BO00194 218 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 BET1O15155 118 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 SOCS1O15524 211 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 OGG1O15527 345 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 TGOLN2O43493 480 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 ZNF735P0CB33 412 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 MIFP14174 115 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 GABRB1P18505 474 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 CALB2P22676 271 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 DUTP33316 252 aaKnown RBP10.34□□□□□ -0.75
VPS29-209ENST00000551655 ETV1P50549 477 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 ZIK1Q3SY52 487 aaPredicted RBP10.34□□□□□ -0.75
VPS29-209ENST00000551655 CCDC58Q4VC31 144 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
VPS29-209ENST00000551655 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 PLEKHJ1Q9NW61 149 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 ARGLU1Q9NWB6 273 aaPredicted RBP10.34□□□□□ -0.75
VPS29-209ENST00000551655 CLEC5AQ9NY25 188 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 OAZ3Q9UMX2 235 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 ETV7Q9Y603 341 aa10.34□□□□□ -0.75
VPS29-209ENST00000551655 CREBL2O60519 120 aaPredicted RBP10.33□□□□□ -0.76
VPS29-209ENST00000551655 DEFA4P12838 97 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 C4BPBP20851 252 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 KLK9Q2XQG4 91 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 CXorf58Q96LI9 332 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 DCUN1D5Q9BTE7 237 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 KLK9Q9UKQ9 250 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 HMCN2Q8NDA2 5059 aa10.33□□□□□ -0.76
VPS29-209ENST00000551655 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 PNMA8CA0A1B0GUJ8 204 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 CGB1A6NKQ9 187 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 SNTNA6NMZ2 147 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 ZNF705EA8MWA4 302 aaPredicted RBP10.32□□□□□ -0.76
VPS29-209ENST00000551655 MRPS14O60783 128 aaKnown RBP10.32□□□□□ -0.76
VPS29-209ENST00000551655 FCGR3BO75015 233 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 HIST1H1BP16401 226 aaKnown RBP10.32□□□□□ -0.76
VPS29-209ENST00000551655 PSMD7P51665 324 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 CDH26Q8IXH8 852 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 FAM24BQ8N5W8 94 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 GIMAP1Q8WWP7 306 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 PGLYRP3Q96LB9 341 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 TM2D1Q9BX74 207 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 OR51E2Q9H255 320 aa10.32□□□□□ -0.76
VPS29-209ENST00000551655 IGHV3-21A0A0B4J1V1 117 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 TRDCB7Z8K6 153 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 KBTBD11O94819 623 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 DHFRP00374 187 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 SRMP19623 302 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 DEFB131AP59861 70 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 KRTAP10-2P60368 255 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 TPBGQ13641 420 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 ZNF414Q96IQ9 312 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 C18orf15Q96N68 181 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 DERL3Q96Q80 235 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 SLC29A1Q99808 456 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 UQCC2Q9BRT2 126 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 RIMS4Q9H426 269 aaPredicted RBP10.31□□□□□ -0.76
VPS29-209ENST00000551655 C12orf4Q9NQ89 552 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
VPS29-209ENST00000551655 J3QRK9 145 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 CHEK1O14757 476 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 YIF1BQ5BJH7 314 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 ZNF367Q7RTV3 350 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 RHPN1-AS1Q9BWJ2 59 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 GHRLQ9UBU3 117 aa10.3□□□□□ -0.76
VPS29-209ENST00000551655 RBM7Q9Y580 266 aaKnown RBP10.3□□□□□ -0.76
VPS29-209ENST00000551655 NDUFA4O00483 81 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 CRHBPP24387 322 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS29-209ENST00000551655 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
VPS29-209ENST00000551655 RPL30P62888 115 aaKnown RBP10.29□□□□□ -0.76
VPS29-209ENST00000551655 NKAIN3Q8N8D7 197 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 TMEM167AQ8TBQ9 72 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 MAFIPQ8WZ33 124 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 ADTRPQ96IZ2 230 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 OR2A7Q96R45 310 aa10.29□□□□□ -0.76
VPS29-209ENST00000551655 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms