RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 RRHO14718 337 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 NDUFA3O95167 84 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 PET100P0DJ07 73 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 NKX2-1P43699 371 aaPredicted RBP13.93□□□□□ -0.18
LETMD1-220ENST00000549686 MMDQ15546 238 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 DEFB112Q30KQ8 113 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 Q6ZRM9 215 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 OR2T35Q8NGX2 323 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 OR52E5Q8NH55 327 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 CSPG4Q6UVK1 2322 aa13.93□□□□□ -0.18
LETMD1-220ENST00000549686 C15orf61A6NNL5 157 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 ST8SIA3O43173 380 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 SLC25A17O43808 307 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 RBMXL2O75526 392 aaKnown RBP13.92□□□□□ -0.18
LETMD1-220ENST00000549686 LY86O95711 162 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 LY6G6DO95868 133 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 CRYGBP07316 175 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 PAX6P26367 422 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 PSMB6P28072 239 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 MAS1LP35410 378 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 RELBQ01201 579 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 PPP1R1CQ8WVI7 109 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 ZDHHC16Q969W1 377 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 RITA1Q96K30 269 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
LETMD1-220ENST00000549686 FOXA2Q9Y261 457 aaPredicted RBP13.92□□□□□ -0.18
LETMD1-220ENST00000549686 ZNF257Q9Y2Q1 563 aa13.92□□□□□ -0.18
LETMD1-220ENST00000549686 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 MED6O75586 246 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 RLN2P04090 185 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 OR9G9P0C7N8 305 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 RPL8P62917 257 aaKnown RBP13.91□□□□□ -0.18
LETMD1-220ENST00000549686 ID3Q02535 119 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 HNF4GQ14541 408 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 IZUMO4Q1ZYL8 232 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
LETMD1-220ENST00000549686 BCL6BQ8N143 479 aaPredicted RBP13.91□□□□□ -0.18
LETMD1-220ENST00000549686 OR5B3Q8NH48 314 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 CDC42EP3Q9UKI2 254 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 TCF19Q9Y242 345 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 POMT1Q9Y6A1 747 aa13.91□□□□□ -0.18
LETMD1-220ENST00000549686 H3BUX3 64 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 M0QZK8 103 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 OR2F2O95006 317 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 CD24P25063 80 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 PLGLAQ15195 96 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 TUSC1Q2TAM9 212 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 CLEC9AQ6UXN8 241 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 Q6YL49 198 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 PIFOQ8TCI5 191 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 SSMEM1Q8WWF3 244 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 RBM14Q96PK6 669 aaKnown RBP13.9□□□□□ -0.18
LETMD1-220ENST00000549686 HSPB7Q9UBY9 170 aa13.9□□□□□ -0.18
LETMD1-220ENST00000549686 A6NDX4 124 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 NCBP2LA6PVI3 153 aaKnown RBP13.89□□□□□ -0.19
LETMD1-220ENST00000549686 WRBO00258 174 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 FGF16O43320 207 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 ACTL6BO94805 426 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 MPC2O95563 127 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 SCGB1D2O95969 90 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 MBPP02686 304 aaPredicted RBP13.89□□□□□ -0.19
LETMD1-220ENST00000549686 PVALBP20472 110 aaPredicted RBP13.89□□□□□ -0.19
LETMD1-220ENST00000549686 F2RL1P55085 397 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 SPCS3P61009 180 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 HSPE1P61604 102 aaKnown RBP13.89□□□□□ -0.19
LETMD1-220ENST00000549686 TNFRSF9Q07011 255 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 PRSS8Q16651 343 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 THAP6Q8TBB0 222 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 COMMD5Q9GZQ3 224 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 PLSCR3Q9NRY6 295 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 MOB4Q9Y3A3 225 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 OR51B2Q9Y5P1 312 aa13.89□□□□□ -0.19
LETMD1-220ENST00000549686 SOX21Q9Y651 276 aaPredicted RBP13.89□□□□□ -0.19
LETMD1-220ENST00000549686 ZNF469Q96JG9 3925 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-220ENST00000549686 OTOGQ6ZRI0 2925 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 TRAV3A0A0B4J244 114 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 IFNA17P01571 189 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 C1QBP02746 253 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 CNTFRP26992 372 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 IER3P46695 156 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 OR2B8PP59922 312 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 S100A10P60903 97 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 RAB32Q13637 225 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 ZFP69Q49AA0 526 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-220ENST00000549686 RBMS3Q6XE24 437 aaKnown RBP13.88□□□□□ -0.19
LETMD1-220ENST00000549686 TMEM86BQ8N661 226 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 C22orf15Q8WYQ4 148 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-220ENST00000549686 RAB40CQ96S21 281 aa13.88□□□□□ -0.19
LETMD1-220ENST00000549686 CLCC1Q96S66 551 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms