RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR1S2Q8NGQ3 325 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ENKURQ8TC29 256 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 LRRC29Q8WV35 223 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 DYRK2Q92630 601 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ABHD14AQ9BUJ0 271 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 OR51B6Q9H340 312 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ELL3Q9HB65 397 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 WASHC3Q9Y3C0 194 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 A0A087WWC5 75 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV1-69DA0A0B4J2H0 117 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 CENPVL3A0A0U1RRI6 287 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SMLR1H3BR10 107 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV1-69P01742 117 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 CD3DP04234 171 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 STAG3L3P0CL85 134 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 HAAOP46952 286 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 GUCA2BQ16661 112 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 ANKRD55Q3KP44 614 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SLC51BQ86UW2 128 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 C12orf45Q8N5I9 185 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 BOLLQ8N9W6 283 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 OR10K1Q8NGX5 313 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 OR4X1Q8NH49 305 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 USMG5Q96IX5 58 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 C20orf144Q9BQM9 153 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 ATG5Q9H1Y0 275 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 YAE1D1Q9NRH1 226 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 TINAGQ9UJW2 476 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 MKI67P46013 3256 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 NBPF19A0A087WUL8 3843 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 MPTX1A8MV57 137 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 B4DSR2 109 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 I3L2K1 104 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 HRASP01112 189 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IGHG4P01861 327 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 MBP02144 154 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 BLVRBP30043 206 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 FABP6P51161 128 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 GPM6AP51674 278 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 H2BFSP57053 126 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 GNG2P59768 71 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IFITM2Q01629 132 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 C2orf68Q2NKX9 166 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 FAM74A3Q4VXF1 159 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 TRIQKQ629K1 86 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF818PQ6ZRF7 136 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SLC25A26Q70HW3 274 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 C5orf56Q8N8D9 126 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 LFNGQ8NES3 379 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 OR4C13Q8NGP0 309 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IL17DQ8TAD2 202 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 TIMD4Q96H15 378 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SSBP3Q9BWW4 388 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 NKX6-2Q9C056 277 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 CHMP1AQ9HD42 196 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 IGLC7A0M8Q6 106 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SMCO3A2RU48 225 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 LEUTXA8MZ59 168 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 VCYO14598 125 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 TGOLN2O43493 480 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 LYZL6O75951 148 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 NXPH4O95158 308 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 PLA2G1BP04054 148 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SOD3P08294 240 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 OR13A1Q8NGR1 328 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SGMS2Q8NHU3 365 aa3.86□□□□□ -1.79
SCAF11-212ENST00000549162 PINX1Q96BK5 328 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 MRPL27Q9P0M9 148 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 MRPS7Q9Y2R9 242 aaKnown RBP3.86□□□□□ -1.79
SCAF11-212ENST00000549162 SPENQ96T58 3664 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ESPL1Q14674 2120 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 FAM231BA6NCW3 169 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 H0Y8G0 127 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 TIMM8AO60220 97 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ADAP1O75689 374 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OCMP0CE72 109 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 PRKXP51817 358 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 RAB11AP62491 216 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ALKBH6Q3KRA9 238 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 TMEM41BQ5BJD5 291 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SPSB3Q6PJ21 355 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 LRP11Q86VZ4 500 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 MEX3DQ86XN8 651 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 TGIF2LYQ8IUE0 185 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF383Q8NA42 475 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OR5M9Q8NGP3 310 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 LHFPL5Q8TAF8 219 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 CISD1Q9NZ45 108 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 UNC13CQ8NB66 2214 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV4-4A0A075B6R2 117 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 CIDEAO60543 219 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 NQO2P16083 231 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 TSPAN5P62079 268 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 PIGYQ3MUY2 71 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 HES5Q5TA89 166 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 RASL11AQ6T310 242 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 TOMM20LQ6UXN7 152 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms