RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MYOD1P15172 320 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 HIST1H1BP16401 226 aaKnown RBP10.8□□□□□ -0.68
RTN3-214ENST00000545432 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
RTN3-214ENST00000545432 MAS1LP35410 378 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 WNT4P56705 351 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 ST3GAL4Q11206 333 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 PUSL1Q8N0Z8 303 aaKnown RBP10.8□□□□□ -0.68
RTN3-214ENST00000545432 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 OR10J5Q8NHC4 309 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 TMEM167AQ8TBQ9 72 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 UBQLN2Q9UHD9 624 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 UFC1Q9Y3C8 167 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 PKD1P98161 4303 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 ADMP35318 185 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 SSX1Q16384 188 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 Q6ZS49 121 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 H1FOOQ8IZA3 346 aaPredicted RBP10.79□□□□□ -0.68
RTN3-214ENST00000545432 ZNF502Q8TBZ5 544 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 CXorf58Q96LI9 332 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 GFI1Q99684 422 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 RARRES2Q99969 163 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 CSTL1Q9H114 145 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 HSPG2P98160 4391 aa10.79□□□□□ -0.68
RTN3-214ENST00000545432 MFSD2BA6NFX1 497 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 CGB1A6NKQ9 187 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 SLC17A2O00624 439 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 BET1O15155 118 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 DHFRP00374 187 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 FCGR3AP08637 254 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 UCHL1P09936 223 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 RPL27AP46776 148 aaKnown RBP10.78□□□□□ -0.68
RTN3-214ENST00000545432 ARFRP1Q13795 201 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 HRH4Q9H3N8 390 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 S4R3C0 116 aa10.78□□□□□ -0.68
RTN3-214ENST00000545432 C11orf94C9JXX5 98 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 CIB2O75838 187 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 AREGP15514 252 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 RPL35AP18077 110 aaKnown RBP10.77□□□□□ -0.69
RTN3-214ENST00000545432 PTBP1P26599 531 aaKnown RBP eCLIP10.77□□□□□ -0.695e-7■■■□□ 14.7
RTN3-214ENST00000545432 MFAP2P55001 183 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 BRWD1-AS2P59051 145 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 P2RY14Q15391 338 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 LAIR2Q6ISS4 152 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 ZNF555Q8NEP9 628 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 OR56B1Q8NGI3 324 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 VSTM2AQ8TAG5 236 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 OR2A7Q96R45 310 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 CENPOQ9BU64 300 aa10.77□□□□□ -0.69
RTN3-214ENST00000545432 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 MPTX1A8MV57 137 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 RTL8CO15255 209 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 KBTBD11O94819 623 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 RPL30P62888 115 aaKnown RBP10.76□□□□□ -0.69
RTN3-214ENST00000545432 EIF4EBP1Q13541 118 aaPredicted RBP10.76□□□□□ -0.69
RTN3-214ENST00000545432 HSD17B12Q53GQ0 312 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
RTN3-214ENST00000545432 LAMTOR1Q6IAA8 161 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 PLCXD1Q9NUJ7 323 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 SMPD3Q9NY59 655 aaPredicted RBP10.76□□□□□ -0.69
RTN3-214ENST00000545432 FBXL17Q9UF56 701 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 PSORS1C1Q9UIG5 152 aa10.76□□□□□ -0.69
RTN3-214ENST00000545432 K7EMT4 169 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 FCGR3BO75015 233 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 MED22Q15528 200 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 VKORC1L1Q8N0U8 176 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 ZNF645Q8N7E2 425 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
RTN3-214ENST00000545432 FKBP14Q9NWM8 211 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 PRELID3BQ9Y3B1 194 aa10.75□□□□□ -0.69
RTN3-214ENST00000545432 DPPA5A6NC42 116 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 IGLL5B9A064 214 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 HLA-DQB1P01920 261 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 GPR183P32249 361 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
RTN3-214ENST00000545432 C2orf76Q3KRA6 126 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 PLET1Q6UQ28 207 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 CD300LFQ8TDQ1 290 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 C6orf62Q9GZU0 229 aaPredicted RBP10.74□□□□□ -0.69
RTN3-214ENST00000545432 RBMX2Q9Y388 322 aaKnown RBP10.74□□□□□ -0.69
RTN3-214ENST00000545432 RBM7Q9Y580 266 aaKnown RBP10.74□□□□□ -0.69
RTN3-214ENST00000545432 ETV7Q9Y603 341 aa10.74□□□□□ -0.69
RTN3-214ENST00000545432 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 MFNGO00587 321 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 TGOLN2O43493 480 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 SLC22A5O76082 557 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 PSMD7P51665 324 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 KCTD9Q7L273 389 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 OR5B3Q8NH48 314 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 FAM3DQ96BQ1 224 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 SRSF8Q9BRL6 282 aaKnown RBP10.73□□□□□ -0.69
RTN3-214ENST00000545432 GINS4Q9BRT9 223 aa10.73□□□□□ -0.69
RTN3-214ENST00000545432 MRPS7Q9Y2R9 242 aaKnown RBP10.73□□□□□ -0.69
RTN3-214ENST00000545432 IGKV1D-8A0A087WSZ0 117 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms