RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 KIR3DP1A8MWS1 328 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 GOLGA8RI6L899 631 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 J3QLI3 93 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 MED6O75586 246 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 SCO1O75880 301 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 GPR75O95800 540 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 IGKV3-11P04433 115 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 MRPL3P09001 348 aaKnown RBP2.46□□□□□ -2.02
SNHG1-222ENST00000545308 FAM228BP0C875 321 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 PET100P0DJ07 73 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 TSPOP30536 169 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 SERPINB1P30740 379 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 COILP38432 576 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-222ENST00000545308 RAB25P57735 213 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 UBE2G2P60604 165 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 SNRPD2P62316 118 aaKnown RBP2.46□□□□□ -2.02
SNHG1-222ENST00000545308 TBPL1P62380 186 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 MYL5Q02045 173 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 BSPH1Q075Z2 132 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 BAXQ07812 192 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 MAPRE2Q15555 327 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ACTBL2Q562R1 376 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ACSBG2Q5FVE4 666 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 AP1ARQ63HQ0 302 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 CYHR1Q6ZMK1 362 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 FAM9CQ8IZT9 166 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 OR5M1Q8NGP8 315 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF420Q8TAQ5 688 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ACTL9Q8TC94 416 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 C22orf15Q8WYQ4 148 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 CCL17Q92583 94 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 FRZBQ92765 325 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 MS4A6EQ96DS6 147 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 FMC1Q96HJ9 113 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ARL5BQ96KC2 179 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 BIRC8Q96P09 236 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 POTEKPQ9BYX7 375 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 ABCB9Q9NP78 766 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
SNHG1-222ENST00000545308 PLXNB1O43157 2135 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 CENPVL3A0A0U1RRI6 287 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 DPRXA6NFQ7 191 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 GOLGA6L10A6NI86 522 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 CENPBD1B2RD01 187 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 GOLGA8MH3BSY2 632 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 FFAR1O14842 300 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 PIN1P1O15428 100 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 PRTN3P24158 256 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 LGALS7P47929 136 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 IDH3GP51553 393 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 RWDD2BP57060 319 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 TMEM33P57088 247 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 TAS2R43P59537 309 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 EBPQ15125 230 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ZNHIT3Q15649 155 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF404Q494X3 552 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 Q499Y3 187 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 RBM48Q5RL73 367 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 BHLHA15Q7RTS1 189 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ORMDL3Q8N138 153 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 RNF10Q8N5U6 811 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 UBL4BQ8N7F7 174 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ORAOV1Q8WV07 137 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 PPWD1Q96BP3 646 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 OR10C1Q96KK4 312 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 CCDC42Q96M95 316 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF251Q9BRH9 671 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 EFCAB11Q9BUY7 163 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 KIFC1Q9BW19 673 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF717Q9BY31 904 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 MRPL20Q9BYC9 149 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 TBL1XR1Q9BZK7 514 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 DSN1Q9H410 356 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 METTL8Q9H825 291 aaKnown RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 DIABLOQ9NR28 239 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 FBXO6Q9NRD1 293 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 CBY1Q9Y3M2 126 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF337Q9Y3M9 751 aa2.45□□□□□ -2.02
SNHG1-222ENST00000545308 PUS1Q9Y606 427 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNHG1-222ENST00000545308 A0A1B0GTI1 187 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 TMEM213A2RRL7 107 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FABP12A6NFH5 140 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 E7EQL1 145 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FABP7O15540 132 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CRXO43186 299 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 MPZL2O60487 215 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 NIPSNAP2O75323 286 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CYB5R3P00387 301 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CDK1P06493 297 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 MSMBP08118 114 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 OCMP0CE72 109 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 LIMS3P0CW19 117 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 LIMS4P0CW20 117 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CD28P10747 220 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF35P13682 527 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms