RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DIRC2Q96SL1 478 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ALKBH7Q9BT30 221 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 CALYQ9NYX4 217 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 IDI2-AS1Q9NZ38 188 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 PXMP4Q9Y6I8 212 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 C19orf67A6NJJ6 358 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 VENTXO95231 258 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 SOD3P08294 240 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 LINC00614P0C842 121 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 STAG3L3P0CL85 134 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CD59P13987 128 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 RPL7P18124 248 aaKnown RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 ICAM4Q14773 271 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 MRPL54Q6P161 138 aaKnown RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 FDCSPQ8NFU4 85 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ITLN1Q8WWA0 313 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CCL17Q92583 94 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 SLC25A10Q9UBX3 287 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 TRBV6-6A0A0A6YYG2 114 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ADCYAP1P18509 176 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CTAG1AP78358 180 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 HES1Q14469 280 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 PSMG4Q5JS54 123 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CYB5R2Q6BCY4 276 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 SCGB1D4Q6XE38 83 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 MOB3BQ86TA1 216 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 PDPNQ86YL7 162 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 WDR31Q8NA23 367 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 MISP3Q96FF7 219 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 DMRTA2Q96SC8 542 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 TMEM140Q9NV12 185 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 IL19Q9UHD0 177 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 TRGV8A0A0C4DH27 118 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 FOXI3A8MTJ6 420 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 DKK1O94907 266 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 NAPSAO96009 420 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 TMEM11P17152 192 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 TNFSF10P50591 281 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 FOXG1P55316 489 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 UBE2L3P68036 154 aaKnown RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 PSG7Q13046 419 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 SLC25A33Q9BSK2 321 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 MRPL18Q9H0U6 180 aaKnown RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 ONECUT1Q9UBC0 465 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 AMMECR1Q9Y4X0 333 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 IGHV2OR16-5A0A0B4J2B6 119 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 AMY1AP04745 511 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CECR9P0C854 216 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 AGAP20933 346 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ID3Q02535 119 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 FOXC1Q12948 553 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 PSG5Q15238 335 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 KRTCAP3Q53RY4 240 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 DOLPP1Q86YN1 238 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 VSTM2AQ8TAG5 236 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ZCCHC14Q8WYQ9 949 aaKnown RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 ZDHHC16Q969W1 377 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 PERPQ96FX8 193 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 CCL13Q99616 98 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 NPCDR1Q9BY65 106 aa4.88□□□□□ -1.63
VPS50-220ENST00000544910 ZNF256Q9Y2P7 627 aaPredicted RBP4.88□□□□□ -1.63
VPS50-220ENST00000544910 TCL1AP56279 114 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS50-220ENST00000544910 MST1LQ2TV78 715 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 SAMD13Q5VXD3 122 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 FAM90A1Q86YD7 464 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 PARLQ9H300 379 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 NPVFQ9HCQ7 196 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 TRAV9-1A0A075B6T8 112 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 C17orf98A8MV24 154 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 TMEM250H0YL14 139 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 PRRX1P54821 245 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 TMEM136Q6ZRR5 245 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 SSX8Q7RTT4 187 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 MDS2Q8NDY4 140 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 OR13A1Q8NGR1 328 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 SFRP2Q96HF1 295 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 RCC1LQ96I51 464 aaKnown RBP4.87□□□□□ -1.63
VPS50-220ENST00000544910 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 SFXN3Q9BWM7 321 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 F5P12259 2224 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 J3QR06 171 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 HLA-DRB1P01911 266 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 TFF3Q07654 80 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 C9orf106Q8NAJ2 232 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 MYOZ3Q8TDC0 251 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 FLYWCH2Q96CP2 140 aaKnown RBP4.87□□□□□ -1.63
VPS50-220ENST00000544910 ZNF714Q96N38 554 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 ZNF355PQ9NSJ1 428 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 MYO9BQ13459 2157 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 C16orf97H3BN30 126 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 KBTBD11O94819 623 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 LEPROTL1O95214 131 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 CEACAM1P13688 526 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 TMEM30BQ3MIR4 351 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 NMSQ5H8A3 153 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 LYPD6Q86Y78 171 aa4.87□□□□□ -1.63
VPS50-220ENST00000544910 H3BVH4 76 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 CSN3P07498 182 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms