RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BMPR1BO00238 502 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 FGF8P55075 233 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 RPEL1Q2QD12 228 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF429Q86V71 674 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM216BQ8N7L0 139 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF426Q9BUY5 554 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 OR2A4O95047 310 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 TBX6O95947 436 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 MBPP02686 304 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 HPXP02790 462 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 LINC00614P0C842 121 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 SELENOTP62341 195 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 OR2A7Q96R45 310 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 MIXL1Q9H2W2 232 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 NPVFQ9HCQ7 196 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 IGLV3-32A0A0A0MS00 114 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 MED19A0JLT2 244 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 PINLYPA6NC86 204 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 IL18BPO95998 194 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 CD5P06127 495 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 COL8A1P27658 744 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 FCER1GP30273 86 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM241Q24JQ0 296 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM201AQ5SY85 155 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 C5orf17Q8NAS9 161 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 C16orf92Q96LL3 132 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 Q96M66 194 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 SSTR5P35346 364 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ATP5G2Q06055 141 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 FBLN7Q53RD9 439 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ACP7Q6ZNF0 438 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ADAD2Q8NCV1 583 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 OR4X2Q8NGF9 303 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 CACNG8Q8WXS5 425 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF837Q96EG3 531 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF586Q9NXT0 402 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 TSSC4Q9Y5U2 329 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF646O15015 1829 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 PDCD11Q14690 1871 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 PTPRQQ9UMZ3 2332 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 TRBV5-7A0A0A0MS05 114 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 CELA3BP08861 270 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 EWSR1Q01844 656 aaKnown RBP eCLIP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 FXYD3Q14802 87 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 LRRC75BQ2VPJ9 315 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 SLC35E4Q6ICL7 350 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 QTRT1Q9BXR0 403 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 PAM16Q9Y3D7 125 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 OR2T8A6NH00 312 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 NPIPB11E5RHQ5 1161 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 RNASEK-C17orf49H0YIS7 233 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 EGR1P18146 543 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 KHDC3LQ587J8 217 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM144Q7Z5S9 345 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 SIGLECL1Q8N7X8 197 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 MANBALQ9NQG1 85 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 SEMA5BQ9P283 1151 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 METRNQ9UJH8 293 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 V9GYH0 126 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 IGKV1D-43A0A0B4J1Z2 117 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ID3Q02535 119 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 C1QTNF5Q9BXJ0 243 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 TM4SF5O14894 197 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 SPINK4O60575 86 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 SNCGO76070 127 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM157CP0CG43 387 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 OR10J1P30954 320 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 RND2P52198 227 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 RRN3P1Q2M238 152 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 Q6ZS92 163 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 HSD17B13Q7Z5P4 300 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 OR10J6PQ8NGY7 276 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 DDB2Q92466 427 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 LSM10Q969L4 123 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 ANKRD36A6QL64 1941 aa5.85□□□□□ -1.47
SRGAP1-206ENST00000543397 TRAV30A0A087WSZ9 112 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 THY1P04216 161 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 NBL1P41271 181 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 AMTP48728 403 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM78Q5T7P6 136 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 STHQ8IWL8 128 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 BMPERQ8N8U9 685 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 NOL4LQ96MY1 436 aaPredicted RBP5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM222Q9H0R3 208 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 NAT8BQ9UHF3 227 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 IGSF23A1L1A6 192 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 IQCF6A8MYZ5 107 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 C11orf94C9JXX5 98 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 F8WDY8 70 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 K7ENP7 123 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 LINC00869P0C866 280 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF137PP52743 207 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 MEF2CQ06413 473 aaPredicted RBP5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 FGFRL1Q8N441 504 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 NPFFR1Q9GZQ6 430 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 COX11Q9Y6N1 276 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM56-RWDD3S4R434 201 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms