RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PRSS54Q6PEW0 395 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 BTNL8Q6UX41 500 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 SSX9Q7RTT3 188 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 SGPP2Q8IWX5 399 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 OR8B3Q8NGG8 313 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 CLDND2Q8NHS1 167 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 RAB1CQ92928 201 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 TIMD4Q96H15 378 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 OR8B2Q96RD0 313 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 CLCC1Q96S66 551 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 AGMATQ9BSE5 352 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 NAA60Q9H7X0 242 aa6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 TET2Q6N021 2002 aaPredicted RBP6.31□□□□□ -1.4
AC005840.3-201ENST00000541888 PLXNB1O43157 2135 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 ITPR3Q14573 2671 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 SAA2-SAA4A0A096LPE2 208 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 PPIAL4CA0A0B4J2A2 164 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 A0A0G2JRQ6 117 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 C3orf85A0A1B0GTC6 90 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 hADV38S2A0JD32 116 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 SAA2P0DJI9 122 aaPredicted RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 PPIAL4GP0DN37 164 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 GZMHP20718 246 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 CDX1P47902 265 aaPredicted RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 BRWD1-AS2P59051 145 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 TMEM187Q14656 261 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 VKORC1L1Q8N0U8 176 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 LYG1Q8N1E2 194 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 C11orf42Q8N5U0 333 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 SLC35G3Q8N808 338 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 TMED6Q8WW62 240 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 NEIL1Q96FI4 390 aaPredicted RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 RBM14Q96PK6 669 aaKnown RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 C2orf88Q9BSF0 95 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 TMEM231Q9H6L2 316 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 METTL8Q9H825 291 aaKnown RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 IDI2-AS1Q9NZ38 188 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 GSKIPQ9P0R6 139 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 KAAG1Q9UBP8 84 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 LINC00312Q9Y6C7 94 aa6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 PRRC2AP48634 2157 aaKnown RBP6.3□□□□□ -1.4
AC005840.3-201ENST00000541888 CR1P17927 2039 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 C17orf98A8MV24 154 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 NPIPB11E5RHQ5 1161 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 F2RL2O00254 374 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 IGKV1-39P01597 117 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 GAPDHP04406 335 aaKnown RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 IGKV1D-39P04432 117 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 CTXN2P0C2S0 81 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 DLX6P56179 175 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 PAX5Q02548 391 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SURF2Q15527 256 aaPredicted RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 CR1LQ2VPA4 569 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 AWAT1Q58HT5 328 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 TMEM268Q5VZI3 342 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 ABHD14AQ9BUJ0 271 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 PATZ1Q9HBE1 687 aaKnown RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 RAB18Q9NP72 206 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 RPS10P5Q9NQ39 176 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 UBE2J1Q9Y385 318 aaPredicted RBP6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 FAM96BQ9Y3D0 163 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 TMED3Q9Y3Q3 217 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 MXRA5Q9NR99 2828 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 IGHV3OR16-10A0A075B7F0 116 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 IGHV3-72A0A0B4J1Y9 119 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SEC14L6B5MCN3 397 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 M0R1X1 148 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 TGOLN2O43493 480 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 MED6O75586 246 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 NQO2P16083 231 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 F2RP25116 425 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 GPR12P47775 334 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 UCP3P55916 312 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 TMEM33P57088 247 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 PKIAP61925 76 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 HTD2P86397 168 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SSX2Q16385 188 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 C9orf152Q5JTZ5 239 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 GGNBP1Q5YKI7 109 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 NCR3LG1Q68D85 454 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 CMTM1Q8IZ96 169 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 ZNF645Q8N7E2 425 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 ZNF439Q8NDP4 499 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 OR52M1Q8NGK5 317 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SCGB3A2Q96PL1 93 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 HRH4Q9H3N8 390 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 SMDT1Q9H4I9 107 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 JPT1Q9UK76 154 aa6.29□□□□□ -1.4
AC005840.3-201ENST00000541888 FLNAP21333 2647 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms