RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.21□□□□□ -0.29
CACFD1-206ENST00000540581 SPINT2O43291 252 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 SRP14P37108 136 aaKnown RBP13.21□□□□□ -0.29
CACFD1-206ENST00000540581 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.29
CACFD1-206ENST00000540581 SOX8P57073 446 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 GBGT1Q8N5D6 347 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 ZBTB34Q8NCN2 500 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 SEPSECSQ9HD40 501 aaKnown RBP13.21□□□□□ -0.29
CACFD1-206ENST00000540581 ROS1P08922 2347 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 ARFGEF3Q5TH69 2177 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 CEP250Q9BV73 2442 aa13.21□□□□□ -0.29
CACFD1-206ENST00000540581 ZNF90Q03938 601 aa13.21□□□□□ -0.3
CACFD1-206ENST00000540581 OR5I1Q13606 314 aa13.21□□□□□ -0.3
CACFD1-206ENST00000540581 SPRNQ5BIV9 151 aa13.21□□□□□ -0.3
CACFD1-206ENST00000540581 MDS2Q8NDY4 140 aa13.21□□□□□ -0.3
CACFD1-206ENST00000540581 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.3
CACFD1-206ENST00000540581 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.3
CACFD1-206ENST00000540581 TCAPO15273 167 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 GCGP01275 180 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 GABRA6Q16445 453 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
CACFD1-206ENST00000540581 DEFB123Q8N688 67 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 SPTBN2O15020 2390 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 MKRN2OSH3BPM6 223 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
CACFD1-206ENST00000540581 CCL11P51671 97 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 ZNF134P52741 427 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 SSTP61278 116 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 CXXC4Q9H2H0 198 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
CACFD1-206ENST00000540581 F2Z2F3 143 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 PRDX2P32119 198 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 CASP6P55212 293 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 IQCJQ1A5X6 159 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 TBX15Q96SF7 602 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
CACFD1-206ENST00000540581 MRPL37Q9BZE1 423 aaKnown RBP13.19□□□□□ -0.3
CACFD1-206ENST00000540581 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
CACFD1-206ENST00000540581 BATFQ16520 125 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 COA6Q5JTJ3 125 aaKnown RBP13.19□□□□□ -0.3
CACFD1-206ENST00000540581 TOMM20LQ6UXN7 152 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 FAM103A1Q9BTL3 118 aaKnown RBP13.19□□□□□ -0.3
CACFD1-206ENST00000540581 HES4Q9HCC6 221 aa13.19□□□□□ -0.3
CACFD1-206ENST00000540581 PDE6DO43924 150 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 VENTXO95231 258 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 CECR9P0C854 216 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 OR4P4Q8NGL7 312 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 SNHG12Q9BXW3 62 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 ELOVL5Q9NYP7 299 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 POLR3KQ9Y2Y1 108 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 CNOT1A5YKK6 2376 aaKnown RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 ERVK-16P61578 105 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 RPL31P62899 125 aaKnown RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 DEFB108BQ8NET1 73 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 OR10G8Q8NGN5 311 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 GMPPAQ96IJ6 420 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 GGTLC1Q9BX51 225 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 TMEM140Q9NV12 185 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 TNCP24821 2201 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 TMEM210A6NLX4 147 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 TCL1AP56279 114 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
CACFD1-206ENST00000540581 NAGKQ9UJ70 344 aa13.18□□□□□ -0.3
CACFD1-206ENST00000540581 TIMP3P35625 211 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 IER3P46695 156 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 GNG10P50151 68 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 PDLIM4P50479 330 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 KIAA1644Q3SXP7 199 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 S1PR3Q99500 378 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 KCNIP2Q9NS61 270 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
CACFD1-206ENST00000540581 TET2Q6N021 2002 aaPredicted RBP13.17□□□□□ -0.3
CACFD1-206ENST00000540581 INTS1Q8N201 2190 aaKnown RBP13.17□□□□□ -0.3
CACFD1-206ENST00000540581 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
CACFD1-206ENST00000540581 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 FAM216AQ8WUB2 273 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 C2orf88Q9BSF0 95 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 ZNRD1Q9P1U0 126 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
CACFD1-206ENST00000540581 C21orf140B9A014 251 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 C15orf65H3BRN8 121 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 CGAP01215 116 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 FXYD3Q14802 87 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 MORN2Q502X0 79 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 DNLZQ5SXM8 178 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 FER1L6-AS2Q96M78 137 aa13.16□□□□□ -0.3
CACFD1-206ENST00000540581 OPN3Q9H1Y3 402 aaPredicted RBP13.16□□□□□ -0.3
CACFD1-206ENST00000540581 K7EN84 100 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms