RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 TPRX1Q8N7U7 411 aa10.99□□□□□ -0.65
DNMT1-203ENST00000540357 LIME1Q9H400 295 aa10.99□□□□□ -0.65
DNMT1-203ENST00000540357 CNIH1O95406 144 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 ORM2P19652 201 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 TEX38Q6PEX7 206 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
DNMT1-203ENST00000540357 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 R4GN57 208 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 WISP1O95388 367 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 CD55P08174 381 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 MRPL14Q6P1L8 145 aaKnown RBP10.98□□□□□ -0.65
DNMT1-203ENST00000540357 ABHD12Q8N2K0 398 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 OR1B1Q8NGR6 318 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 MRPS18CQ9Y3D5 142 aaKnown RBP10.98□□□□□ -0.65
DNMT1-203ENST00000540357 HEATR5AQ86XA9 2040 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 OR1L8Q8NGR8 309 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 PLPPR1Q8TBJ4 325 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 KLF3P57682 345 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-203ENST00000540357 ZNF146Q15072 292 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 IMMP1LQ96LU5 166 aa10.98□□□□□ -0.65
DNMT1-203ENST00000540357 ZNF703Q9H7S9 590 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-203ENST00000540357 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 ZNF716A6NP11 495 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 LEPROTL1O95214 131 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 COL8A1P27658 744 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 TDHQ8IZJ6 230 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 MS4A5Q9H3V2 200 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 IGKV1-5P01602 117 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 DOLPP1Q86YN1 238 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 RNF24Q9Y225 148 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 UNC13CQ8NB66 2214 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 NGBQ9NPG2 151 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 TNFRSF1AP19438 455 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 TIMP3P35625 211 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 FAM122AQ96E09 287 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 WNT10AQ9GZT5 417 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 ELOVL5Q9NYP7 299 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 RNF115Q9Y4L5 304 aa10.97□□□□□ -0.65
DNMT1-203ENST00000540357 A6NNC1 897 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 IFNL4K9M1U5 179 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 CSN3P07498 182 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 MPV17P39210 176 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 UBALD2Q8IYN6 164 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 FSCN3Q9NQT6 498 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 IGLV3-1P01715 115 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 PPOXP50336 477 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 SELENOTP62341 195 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 ZNF826PQ6ZT77 177 aa10.96□□□□□ -0.65
DNMT1-203ENST00000540357 TYMSP04818 313 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 RFPL3SP0C7P2 107 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 CFHR1Q03591 330 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 DENND4AQ7Z401 1863 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 COL4A6Q14031 1691 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 C21orf140B9A014 251 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 NPIPB11E5RHQ5 1161 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 CGAP01215 116 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 TMEM97Q5BJF2 176 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 RAB1CQ92928 201 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 EAF1Q96JC9 268 aaPredicted RBP10.96□□□□□ -0.66
DNMT1-203ENST00000540357 AAMDCQ9H7C9 122 aa10.96□□□□□ -0.66
DNMT1-203ENST00000540357 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.66
DNMT1-203ENST00000540357 KIF26AQ9ULI4 1882 aaPredicted RBP10.96□□□□□ -0.66
DNMT1-203ENST00000540357 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 DLL1O00548 723 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 PAX9P55771 341 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 ARL6IP6Q8N6S5 226 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 OR2T6Q8NHC8 308 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SAP25Q8TEE9 199 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SNHG12Q9BXW3 62 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 ZFP30Q9Y2G7 519 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 A0A0G2JRQ6 117 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 RAMP3O60896 148 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 MOGAT3Q86VF5 341 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 HARBI1Q96MB7 349 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.95□□□□□ -0.66
DNMT1-203ENST00000540357 ZNF324O75467 553 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-203ENST00000540357 TMEM50AO95807 157 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SFTPCP11686 197 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SSTR5P35346 364 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 TNFAIP6P98066 277 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-203ENST00000540357 ZADH2Q8N4Q0 377 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 FGFBP3Q8TAT2 258 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SEMA5BQ9P283 1151 aa10.95□□□□□ -0.66
DNMT1-203ENST00000540357 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-203ENST00000540357 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms