RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 MS4A5Q9H3V2 200 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 A0A087X0M5 115 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 A0A1B0GX30 115 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 PDE6DO43924 150 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 HNF1AP20823 631 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
NEK6-213ENST00000540326 SSMEM1Q8WWF3 244 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 WFIKKN1Q96NZ8 548 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 MGST2Q99735 147 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 MGAQ8IWI9 3026 aa10.29□□□□□ -0.76
NEK6-213ENST00000540326 EP300Q09472 2414 aaPredicted RBP10.29□□□□□ -0.76
NEK6-213ENST00000540326 TRBV20OR9-2A0A075B6H5 130 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 ZNF705GA8MUZ8 300 aaPredicted RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 DVL1O14640 695 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 SLC31A2O15432 143 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 GFRA3O60609 400 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 IL3RAP26951 378 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 SRP14P37108 136 aaKnown RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 KCNIP4Q6PIL6 250 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 OR5R1Q8NH85 324 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 DCHS1Q96JQ0 3298 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 A0A0U1RQK1 487 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 ZNF320A2RRD8 509 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 SRRM5B3KS81 715 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 M0R296 226 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 AQP7O14520 342 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■■■□□ 19.1
NEK6-213ENST00000540326 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 VDAC2P45880 294 aaPredicted RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 PCP4P48539 62 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 LOXL3P58215 753 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 ERVK-16P61578 105 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 RELBQ01201 579 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 FAM201AQ5SY85 155 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 MBNL2Q5VZF2 373 aaKnown RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 TRAT1Q6PIZ9 186 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 FAM90A1Q86YD7 464 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 GCSAMQ8N6F7 178 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 C1orf162Q8NEQ5 155 aaPredicted RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 RNASEH2CQ8TDP1 164 aaKnown RBP10.28□□□□□ -0.76
NEK6-213ENST00000540326 RAB1CQ92928 201 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 S1PR3Q99500 378 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 JPT1Q9UK76 154 aa10.28□□□□□ -0.76
NEK6-213ENST00000540326 CISD2Q8N5K1 135 aaKnown RBP10.27□□□□□ -0.76
NEK6-213ENST00000540326 ACY3Q96HD9 319 aa10.27□□□□□ -0.76
NEK6-213ENST00000540326 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.76
NEK6-213ENST00000540326 IFI27L2Q9H2X8 130 aa10.27□□□□□ -0.76
NEK6-213ENST00000540326 KCNIP2Q9NS61 270 aa10.27□□□□□ -0.76
NEK6-213ENST00000540326 PRR33A8MZF0 331 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 PRSS46E5RG02 174 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 MGST3O14880 152 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 TNFSF13O75888 250 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 OPRK1P41145 380 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
NEK6-213ENST00000540326 TRIP6Q15654 476 aaKnown RBP10.27□□□□□ -0.77
NEK6-213ENST00000540326 AARDQ4LEZ3 155 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 VHLLQ6RSH7 139 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 MOGAT3Q86VF5 341 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 OR2V2Q96R30 315 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 ZNF71Q9NQZ8 489 aaPredicted RBP10.27□□□□□ -0.77
NEK6-213ENST00000540326 PLSCR4Q9NRQ2 329 aa10.27□□□□□ -0.77
NEK6-213ENST00000540326 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 YPEL1O60688 119 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 MPDU1O75352 247 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 TYMSP04818 313 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 WT1P19544 449 aaPredicted RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 PDLIM4P50479 330 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 ZNF83P51522 516 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 ZNF664Q8N3J9 261 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 SARAFQ96BY9 339 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 STARD4Q96DR4 205 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 C1orf159Q96HA4 380 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 YPEL2Q96QA6 119 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 DKK4Q9UBT3 224 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 TCF19Q9Y242 345 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 STAG3L2P0CL84 134 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 STAG3L3P0CL85 134 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 PAX5Q02548 391 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 BHLHA15Q7RTS1 189 aaPredicted RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 DMRTC2Q8IXT2 367 aaPredicted RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 PROCRQ9UNN8 238 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 CACNA1HO95180 2353 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 DSCAMO60469 2012 aa10.26□□□□□ -0.77
NEK6-213ENST00000540326 MAP1BP46821 2468 aaKnown RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 CNOT1A5YKK6 2376 aaKnown RBP10.26□□□□□ -0.77
NEK6-213ENST00000540326 A0A1B0GV90 55 aa10.25□□□□□ -0.77
NEK6-213ENST00000540326 SPRY3O43610 288 aa10.25□□□□□ -0.77
NEK6-213ENST00000540326 MYOD1P15172 320 aa10.25□□□□□ -0.77
NEK6-213ENST00000540326 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms