RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 KHDC1LQ5JSQ8 128 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 PHYHD1Q5SRE7 291 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF774Q6NX45 483 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 RPP25LQ8N5L8 163 aaKnown RBP6.41□□□□□ -1.38
CCDC60-204ENST00000539847 OR5AN1Q8NGI8 311 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 OR5A2Q8NGI9 324 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 OR5P3Q8WZ94 311 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 RND1Q92730 232 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 MS4A10Q96PG2 267 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 CIB3Q96Q77 187 aaPredicted RBP6.41□□□□□ -1.38
CCDC60-204ENST00000539847 PARLQ9H300 379 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 MSL2Q9HCI7 577 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 TMEM106BQ9NUM4 274 aa6.41□□□□□ -1.38
CCDC60-204ENST00000539847 KLF13Q9Y2Y9 288 aaPredicted RBP6.41□□□□□ -1.38
CCDC60-204ENST00000539847 MRPS18CQ9Y3D5 142 aaKnown RBP6.41□□□□□ -1.38
CCDC60-204ENST00000539847 FLNAP21333 2647 aaKnown RBP6.41□□□□□ -1.38
CCDC60-204ENST00000539847 NSD1Q96L73 2696 aaPredicted RBP6.4□□□□□ -1.38
CCDC60-204ENST00000539847 DNAJC13O75165 2243 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 IGKV1D-13A0A0B4J2D9 117 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 LRRC3CA6NJW4 275 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 C17orf112F2Z3M2 114 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 KLRC4-KLRK1H3BQV0 150 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 ZIC3O60481 467 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 SCGB1D1O95968 90 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 KRASP01116 189 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 SCTP09683 121 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 OR4A8P0C604 315 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 IGKV1-13P0DP09 117 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 GNB2P62879 340 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 SLC38A11Q08AI6 406 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 CEACAM21Q3KPI0 293 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 COL5A1-AS1Q5SY13 56 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 PLCXD3Q63HM9 321 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 SPINK14Q6IE38 97 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 TEX38Q6PEX7 206 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 TEPPQ6URK8 271 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 HAPLN4Q86UW8 402 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 RPS19BP1Q86WX3 136 aaKnown RBP6.4□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF611Q8N823 705 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 OR10G3Q8NGC4 313 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 OR10V1Q8NGI7 309 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 OR10J5Q8NHC4 309 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 FAM216AQ8WUB2 273 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF385AQ96PM9 386 aaKnown RBP6.4□□□□□ -1.38
CCDC60-204ENST00000539847 RASL10BQ96S79 203 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 RSG1Q9BU20 258 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 DEFB126Q9BYW3 111 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 OR2H1Q9GZK4 316 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 WNT5BQ9H1J7 359 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 GPR35Q9HC97 309 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 KCNIP2Q9NS61 270 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 LIN7CQ9NUP9 197 aaKnown RBP6.4□□□□□ -1.38
CCDC60-204ENST00000539847 HSPB7Q9UBY9 170 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 FUT9Q9Y231 359 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 TRAPPC1Q9Y5R8 145 aa6.4□□□□□ -1.38
CCDC60-204ENST00000539847 CHCHD2Q9Y6H1 151 aaPredicted RBP6.4□□□□□ -1.38
CCDC60-204ENST00000539847 CSPG4Q6UVK1 2322 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 SAA2-SAA4A0A096LPE2 208 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1-6A0A0C4DH72 117 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 TRAPPC2LH3BP13 241 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-204ENST00000539847 HS3ST1O14792 307 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 MPDU1O75352 247 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 CBR3O75828 277 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 CD55P08174 381 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF32P17041 273 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 IL3RAP26951 378 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ELLP55199 621 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-204ENST00000539847 MLF1P58340 268 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ERVS71-1P61550 626 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 PPP1CBP62140 327 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 RPS16P62249 146 aaKnown RBP6.39□□□□□ -1.39
CCDC60-204ENST00000539847 MRPS11P82912 194 aaKnown RBP6.39□□□□□ -1.39
CCDC60-204ENST00000539847 PSG4Q00888 419 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 P2RY6Q15077 328 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 TMEM183BQ1AE95 376 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 C16orf47Q6ZP98 133 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-204ENST00000539847 Q6ZRM9 215 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 WDR31Q8NA23 367 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 OR10G9Q8NGN4 311 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 PIGCQ92535 297 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 TMEM45BQ96B21 275 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 MBD6Q96DN6 1003 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 WFIKKN1Q96NZ8 548 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 HES7Q9BYE0 225 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 LINC00470Q9BZP3 86 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 PKIBQ9C010 78 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 VSIRQ9H7M9 311 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 SH2D2AQ9NP31 389 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ELOVL5Q9NYP7 299 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF581Q9P0T4 197 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 ZFP30Q9Y2G7 519 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
CCDC60-204ENST00000539847 IGHV3-20A0A0C4DH32 117 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 A0A0G2JRQ6 117 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 A0A0U1RQK1 487 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms