RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF90Q03938 601 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 Q0VG73 95 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 GUSBP1Q15486 140 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 SPINK9Q5DT21 86 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 OR4S2Q8NH73 311 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
UBE3B-209ENST00000539584 PATZ1Q9HBE1 687 aaKnown RBP10.99□□□□□ -0.65
UBE3B-209ENST00000539584 TRBV20OR9-2A0A075B6H5 130 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 LYZL6O75951 148 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 MT-ND6P03923 174 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
UBE3B-209ENST00000539584 OR10J4P0C629 311 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 RAB4AP20338 218 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 ADMP35318 185 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 RPS16P62249 146 aaKnown RBP10.98□□□□□ -0.65
UBE3B-209ENST00000539584 RTL8BQ17RB0 113 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 VASH2Q86V25 355 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 CXorf67Q86X51 503 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-209ENST00000539584 DMRTC2Q8IXT2 367 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-209ENST00000539584 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 C19orf24Q9BVV8 132 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 POLR3KQ9Y2Y1 108 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-209ENST00000539584 R4GN57 208 aa10.98□□□□□ -0.65
UBE3B-209ENST00000539584 IGHV3-43A0A0B4J1X8 118 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 SCO2A0A1W2PP80 73 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 RRHO14718 337 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 PROP1O75360 226 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 IGHG3P01860 377 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 IGHV3-43DP0DP04 118 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 DEFA4P12838 97 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 CRISP2P16562 243 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 TNFSF10P50591 281 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 RPL31P62899 125 aaKnown RBP10.97□□□□□ -0.65
UBE3B-209ENST00000539584 ARG2P78540 354 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 EFNB3Q15768 340 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 MIC13Q5XKP0 118 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 TMEM256Q8N2U0 113 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 RFESDQ8TAC1 157 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 ADTRPQ96IZ2 230 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 TMEM140Q9NV12 185 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-209ENST00000539584 SRRM5B3KS81 715 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 M0R1X1 148 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 IL6RP08887 468 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-209ENST00000539584 EGR1P18146 543 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-209ENST00000539584 WDR73Q6P4I2 378 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 GCNT2Q8N0V5 402 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 SNHG12Q9BXW3 62 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 ENY2Q9NPA8 101 aa10.97□□□□□ -0.65
UBE3B-209ENST00000539584 IGHV3-64DA0A0J9YX35 117 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 DEFB108AA8MXU0 73 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 IGLV1-44P01699 117 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 NPY1RP25929 384 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
UBE3B-209ENST00000539584 PRSS8Q16651 343 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 RPEL1Q2QD12 228 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 SLC24A4Q8NFF2 622 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 DDB2Q92466 427 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
UBE3B-209ENST00000539584 WDFY3Q8IZQ1 3526 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 TNFSF13O75888 250 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 THBS3P49746 956 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 LGALS4P56470 323 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 LOXL3P58215 753 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PRR20EP86478 221 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PRR20CP86479 221 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PRR20DP86480 221 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PRR20BP86481 221 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PRR20AP86496 221 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 POU2AF1Q16633 256 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 TMEM183BQ1AE95 376 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 TMEM30BQ3MIR4 351 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 PNKDQ8N490 385 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 STPG3Q8N7X2 389 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 SDSLQ96GA7 329 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 EAF1Q96JC9 268 aaPredicted RBP10.96□□□□□ -0.66
UBE3B-209ENST00000539584 TBX15Q96SF7 602 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.66
UBE3B-209ENST00000539584 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 TMEM14BQ9NUH8 114 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 SLC45A2Q9UMX9 530 aa10.96□□□□□ -0.66
UBE3B-209ENST00000539584 YTHDF2Q9Y5A9 579 aaKnown RBP10.96□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF705FA8MVS1 300 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-209ENST00000539584 EREGO14944 169 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-209ENST00000539584 PLA2G5P39877 138 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms