RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ACTBP60709 375 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CXCR4P61073 352 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RAB14P61106 215 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PPP3R1P63098 170 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CX3CL1P78423 397 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 IFITM2Q01629 132 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF816Q0VGE8 651 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 IL24Q13007 206 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PTGES3Q15185 160 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SPHARQ15513 63 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MMDQ15546 238 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SSX1Q16384 188 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TATDN3Q17R31 274 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MRGPRG-AS1Q2M3A8 158 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 BCL2L15Q5TBC7 163 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2G6Q5TZ20 316 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MEDAGQ5VYS4 303 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SLX4IPQ5VYV7 408 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 LCN12Q6JVE5 192 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 FAHD1Q6P587 224 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 UNQ5815/PRO19632Q6UWF5 114 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 LHFPL3Q86UP9 236 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PPP1R27Q86WC6 154 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ELMOD2Q8IZ81 293 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RDH10Q8IZV5 341 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 Q8N402 240 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 YIPF7Q8N8F6 280 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 UXS1Q8NBZ7 420 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 LFNGQ8NES3 379 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 OR10H4Q8NGA5 316 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 OR52I1Q8NGK6 324 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 OR5H6Q8NGV6 325 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 C11orf45Q8TAV5 145 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PLPPR1Q8TBJ4 325 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 GNPDA2Q8TDQ7 276 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF431Q8TF32 576 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CCDC107Q8WV48 283 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RTN4IP1Q8WWV3 396 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 DEDD2Q8WXF8 326 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CACNG8Q8WXS5 425 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RFT1Q96AA3 541 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RRNAD1Q96FB5 475 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 URB1-AS1Q96HZ7 61 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 INTS14Q96SY0 518 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 GINS4Q9BRT9 223 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PKIBQ9C010 78 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SRRQ9GZT4 340 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 OR51V1Q9H2C8 321 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 HRH4Q9H3N8 390 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 FBXL15Q9H469 300 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC25A19Q9HC21 320 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ZC4H2Q9NQZ6 224 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF355PQ9NSJ1 428 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MCUBQ9NWR8 336 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TXNL4BQ9NX01 149 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC2A8Q9NY64 477 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CNOT2Q9NZN8 540 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 UBQLN2Q9UHD9 624 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TBC1D24Q9ULP9 559 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ING4Q9UNL4 249 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 COPS3Q9UNS2 423 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 FOXA2Q9Y261 457 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPS28Q9Y2Q9 187 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPS7Q9Y2R9 242 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 POLDIP2Q9Y2S7 368 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAV24A0A0B4J272 114 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 IGKV1-9A0A0C4DH69 117 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 A0A0U1RQV5 110 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 C13orf42A0A1B0GVH6 325 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 A0A1W2PPK0 400 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 DAPL1A0PJW8 107 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 PCP4L1A6NKN8 68 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF729A6NN14 1252 aaPredicted RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 EPM2AB3EWF7 344 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF670-ZNF695F2Z2N8 137 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 INMT-MINDY4F8WBC2 141 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 TEX46H3BTG2 121 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 J3QLW9 94 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 GABRPO00591 440 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 SH2D1BO14796 132 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OGG1O15527 345 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 LYRM1O43325 122 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 BUB3O43684 328 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 PRKYO43930 277 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF780AO75290 641 aaPredicted RBP2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 DHRS3O75911 302 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 S1PR2O95136 353 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 DHFRP00374 187 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 IGLV3-1P01715 115 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 HLA-DRB1P01911 266 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 APOC1P02654 83 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 TTRP02766 147 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 FCER2P06734 321 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 APELAP0DMC3 54 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 OR5H8P0DN80 308 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 FOLR2P14207 255 aa2.15□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF44P15621 663 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms