RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SRSF12Q8WXF0 261 aaKnown RBP10.43□□□□□ -0.74
CAPN1-227ENST00000533909 FXYD6Q9H0Q3 95 aa10.43□□□□□ -0.74
CAPN1-227ENST00000533909 GNB4Q9HAV0 340 aa10.43□□□□□ -0.74
CAPN1-227ENST00000533909 MTFP1Q9UDX5 166 aa10.43□□□□□ -0.74
CAPN1-227ENST00000533909 RSL24D1Q9UHA3 163 aaKnown RBP10.43□□□□□ -0.74
CAPN1-227ENST00000533909 CEPT1Q9Y6K0 416 aa10.43□□□□□ -0.74
CAPN1-227ENST00000533909 A0A0G2JLM5 398 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 C13orf42A0A1B0GVH6 325 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 H3BUA1 57 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 KBTBD11O94819 623 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 CD3DP04234 171 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 NQO2P16083 231 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 TAS2R31P59538 309 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 DGCR2P98153 550 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 SSBP1Q04837 148 aaKnown RBP10.42□□□□□ -0.74
CAPN1-227ENST00000533909 ARRDC1Q8N5I2 433 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 DMBX1Q8NFW5 382 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 MYOZ3Q8TDC0 251 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 FYTTD1Q96QD9 318 aaKnown RBP10.42□□□□□ -0.74
CAPN1-227ENST00000533909 P2RX4Q99571 388 aa10.42□□□□□ -0.74
CAPN1-227ENST00000533909 FABP12A6NFH5 140 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 PGLYRP1O75594 196 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 RAB3DO95716 219 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 IGHV3-11P01762 117 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 OR8U8P0C7N1 319 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 S100A5P33763 92 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 MAS1LP35410 378 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 RPL27AP46776 148 aaKnown RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 RPL8P62917 257 aaKnown RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 ZNF616Q08AN1 781 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 SCGB2B2Q4G0G5 96 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 TMEM229BQ8NBD8 167 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 OR4A5Q8NH83 315 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 TMEM167AQ8TBQ9 72 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 TINAGL1Q9GZM7 467 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 SLIRPQ9GZT3 109 aaKnown RBP10.41□□□□□ -0.74
CAPN1-227ENST00000533909 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 COMMD9Q9P000 198 aa10.41□□□□□ -0.74
CAPN1-227ENST00000533909 S1PR2O95136 353 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 LGALS1P09382 135 aaKnown RBP10.4□□□□□ -0.74
CAPN1-227ENST00000533909 OR9G9P0C7N8 305 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 F2RP25116 425 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 LPAR6P43657 344 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 BRWD1-AS2P59051 145 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-227ENST00000533909 RUNX1Q01196 453 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 MEF2DQ14814 521 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 C10orf55Q5SWW7 151 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 STEAP1BQ6NZ63 245 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 SLC25A42Q86VD7 318 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 PUSL1Q8N0Z8 303 aaKnown RBP10.4□□□□□ -0.74
CAPN1-227ENST00000533909 SMIM4Q8WVI0 70 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 RSRP1Q9BUV0 290 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
CAPN1-227ENST00000533909 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.75
CAPN1-227ENST00000533909 TNCP24821 2201 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 I3L521 148 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 DHFRP00374 187 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 RPA2P15927 270 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 HLA-GP17693 338 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 TNFSF8P32971 234 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 PPP5CP53041 499 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 UCP3P55916 312 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 KIAA0141Q14154 515 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-227ENST00000533909 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 ZFAND1Q8TCF1 268 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-227ENST00000533909 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
CAPN1-227ENST00000533909 ZMAT5Q9UDW3 170 aaKnown RBP10.39□□□□□ -0.75
CAPN1-227ENST00000533909 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 SEC14L6B5MCN3 397 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 LINC01619G3V211 115 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 ZNF701M0R085 212 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-227ENST00000533909 CTDSPLO15194 276 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 SNAPC5O75971 98 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 KRASP01116 189 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-227ENST00000533909 SERPINE2P07093 398 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 AKAIN1P0CW23 69 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 MRGPRG-AS1Q2M3A8 158 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 PDLIM3Q53GG5 364 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-227ENST00000533909 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-227ENST00000533909 ASPHD1Q5U4P2 390 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 FOXB2Q5VYV0 432 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 TERB2Q8NHR7 220 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 ZNF486Q96H40 463 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-227ENST00000533909 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 COPZ2Q9P299 210 aa10.38□□□□□ -0.75
CAPN1-227ENST00000533909 UPK2O00526 184 aa10.37□□□□□ -0.75
CAPN1-227ENST00000533909 CD74P04233 296 aa10.37□□□□□ -0.75
CAPN1-227ENST00000533909 DEFA4P12838 97 aa10.37□□□□□ -0.75
CAPN1-227ENST00000533909 ECI1P42126 302 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms