RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 PXMP4Q9Y6I8 212 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 A0A0G2JMZ2 1700 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 LRRC37A2A6NM11 1700 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 IGLV3-32A0A0A0MS00 114 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 H3BQ15 152 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 PGLYRP1O75594 196 aaPredicted RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 MAS1LP35410 378 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 EFNB2P52799 333 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 AMELYQ99218 206 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 MOSP00540 346 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 EFNA4P52798 201 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 DNLZQ5SXM8 178 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 PPP1R27Q86WC6 154 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 C1QTNF5Q9BXJ0 243 aa9.12□□□□□ -0.95
COLCA1-203ENST00000532918 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
COLCA1-203ENST00000532918 MED19A0JLT2 244 aaPredicted RBP9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ZNHIT1O43257 154 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 SOD3P08294 240 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 EGR4Q05215 589 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 C19orf24Q9BVV8 132 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 A0A0B4J293 547 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 GALNT14Q96FL9 552 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ASCC3Q8N3C0 2202 aaKnown RBP9.11□□□□□ -0.95
COLCA1-203ENST00000532918 SPTA1P02549 2419 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 PLAURQ03405 335 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF506Q5JVG8 444 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 FAM166AQ6J272 317 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 PQLC2Q6ZP29 291 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ZNRF1Q8ND25 227 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 ST6GAL2Q96JF0 529 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
COLCA1-203ENST00000532918 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 ERVH48-1M5A8F1 160 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
COLCA1-203ENST00000532918 SEMA5BQ9P283 1151 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 PROB1E7EW31 1015 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 NPIPB9F8W1W9 429 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 IGKV1D-33P01593 117 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 IGKV1-33P01594 117 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 MYOD1P15172 320 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 SAPCD1Q5SSQ6 148 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 COLCA1Q6ZS62 124 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 PSMG3Q9BT73 122 aaPredicted RBP9.1□□□□□ -0.95
COLCA1-203ENST00000532918 VCX2Q9H322 139 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 RBKSQ9H477 322 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 TNFSF18Q9UNG2 199 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 C17orf51A8MQB3 221 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 PAGE4O60829 102 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 KBTBD11-OT1A0A1B0GTJ5 212 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 DLX6P56179 175 aa9.1□□□□□ -0.95
COLCA1-203ENST00000532918 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
COLCA1-203ENST00000532918 GPX1P07203 203 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 SEC11BP0C7V7 166 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 LDLRAD3Q86YD5 345 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 J3QKU1 62 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 NIT1Q86X76 327 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 GREB1LQ9C091 1923 aaPredicted RBP9.09□□□□□ -0.95
COLCA1-203ENST00000532918 PSG7Q13046 419 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 C17orf82Q86X59 251 aaPredicted RBP9.09□□□□□ -0.95
COLCA1-203ENST00000532918 NUDT10Q8NFP7 164 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 ARPC1AQ92747 370 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 NUDT11Q96G61 164 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 SOSTQ9BQB4 213 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 LTBP1Q14766 1721 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
COLCA1-203ENST00000532918 WDR25Q64LD2 544 aaPredicted RBP9.09□□□□□ -0.95
COLCA1-203ENST00000532918 RFLNBQ8N5W9 214 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 LEAP2Q969E1 77 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 SLC25A28Q96A46 364 aa9.09□□□□□ -0.95
COLCA1-203ENST00000532918 SLC25A16P16260 332 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 UCP3P55916 312 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 ZNF841Q6ZN19 808 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 C9orf62Q8N4C0 152 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 FAM216BQ8N7L0 139 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 SPRR3Q9UBC9 169 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 TCF19Q9Y242 345 aa9.09□□□□□ -0.96
COLCA1-203ENST00000532918 A8MWL6 223 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 RCC1P18754 421 aaPredicted RBP9.08□□□□□ -0.96
COLCA1-203ENST00000532918 TWIST1Q15672 202 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 LRRC75AQ8NAA5 344 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 HSPB7Q9UBY9 170 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 OPN4Q9UHM6 478 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 CXorf65A6NEN9 183 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 MT-ND6P03923 174 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
COLCA1-203ENST00000532918 OR51G1Q8NGK1 321 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 MRPL32Q9BYC8 188 aaKnown RBP9.08□□□□□ -0.96
COLCA1-203ENST00000532918 FBXL7Q9UJT9 491 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms