RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FAM90A1Q86YD7 464 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 HILPDAQ9Y5L2 63 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 MYO7BQ6PIF6 2116 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 ETV2O00321 342 aaPredicted RBP12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 ATP5IP56385 69 aaPredicted RBP12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 FAM57AQ8TBR7 257 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 YTHDF2Q9Y5A9 579 aaKnown RBP12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 IGHV1-69-2A0A0G2JMI3 117 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 FGF16O43320 207 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 BMI1P35226 326 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 B3GALT5-AS1P59052 145 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 ZNF497Q6ZNH5 498 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 TMEM171Q8WVE6 324 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 SPSB4Q96A44 273 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 COL6A6A6NMZ7 2263 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 CFPP27918 469 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 RPL29P47914 159 aaKnown RBP12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 ID3Q02535 119 aa12.9□□□□□ -0.34
PCDHA3-202ENST00000532566 PPIAL4CA0A0B4J2A2 164 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 B9A039 149 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 GOSR1O95249 250 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 PLAUP00749 431 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 PPIAL4GP0DN37 164 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 FOXL2NBQ6ZUU3 175 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 NPCDR1Q9BY65 106 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 DNAJC4Q9NNZ3 241 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 TGIF2-C20orf24A0A0A6YYL0 155 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 CSRP1P21291 193 aaKnown RBP12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 MFAP2P55001 183 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 TM4SF5O14894 197 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 LRP11Q86VZ4 500 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 WDR31Q8NA23 367 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 SCNM1Q9BWG6 230 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 COMPP49747 757 aaPredicted RBP12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 MUC15Q8N387 334 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF524Q96C55 264 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 FAM122AQ96E09 287 aa12.89□□□□□ -0.35
PCDHA3-202ENST00000532566 ISLRO14498 428 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 CD81P60033 236 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 OSR1Q8TAX0 266 aaPredicted RBP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 LPAR2Q9HBW0 351 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 A0A087X0M5 115 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 A0A1B0GX30 115 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 RIGQ13278 110 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 OR2D3Q8NGH3 330 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 STARD4Q96DR4 205 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 PCNX1Q96RV3 2341 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 M0R2Z0 102 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 WISP1O95388 367 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 CA2P00918 260 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 MT-ND6P03923 174 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 GGACTQ9BVM4 153 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 DIDO1Q9BTC0 2240 aaKnown RBP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 CSN3P07498 182 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 SRSF7Q16629 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 IBA57Q5T440 356 aaKnown RBP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF383Q8NA42 475 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 OR4D5Q8NGN0 318 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
PCDHA3-202ENST00000532566 AGAP20933 346 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF324BQ6AW86 544 aaPredicted RBP12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 WDFY1Q8IWB7 410 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 IL18BPO95998 194 aa12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
PCDHA3-202ENST00000532566 A8MWL6 223 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 APCSP02743 223 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 ARF6P62330 175 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 PCSK4Q6UW60 755 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 PGPA6NDG6 321 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 NAPSAO96009 420 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 SLC35B1P78383 322 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms