RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TMEM217Q8N7C4 229 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 OR52L2PQ8NGH6 319 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 OR5D13Q8NGL4 314 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 RFESDQ8TAC1 157 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
USP35-207ENST00000530546 RPRMQ9NS64 109 aa9.65□□□□□ -0.86
USP35-207ENST00000530546 BMP5P22003 454 aa9.65□□□□□ -0.87
USP35-207ENST00000530546 GPR146Q96CH1 333 aa9.65□□□□□ -0.87
USP35-207ENST00000530546 ELOVL1Q9BW60 279 aa9.65□□□□□ -0.87
USP35-207ENST00000530546 NBEAQ8NFP9 2946 aa9.65□□□□□ -0.87
USP35-207ENST00000530546 IGHV3-43A0A0B4J1X8 118 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 C12orf77C9JDV5 145 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 CHST1O43916 411 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 IGHV3-43DP0DP04 118 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 PTTG1IPP53801 180 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 ID3Q02535 119 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 FAM27E3Q08E93 113 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 SLC25A24Q6NUK1 477 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 DCTN5Q9BTE1 182 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 HES4Q9HCC6 221 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 IGHV3OR15-7A0A075B7D8 119 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 SPRY3O43610 288 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 TMEM50AO95807 157 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 HNF1AP20823 631 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 TPPP2P59282 170 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
USP35-207ENST00000530546 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
USP35-207ENST00000530546 SPRNQ5BIV9 151 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 LCN15Q6UWW0 184 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 PLPPR2Q96GM1 343 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 COQ2Q96H96 371 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 MBNL3Q9NUK0 354 aaKnown RBP9.64□□□□□ -0.87
USP35-207ENST00000530546 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
USP35-207ENST00000530546 A8MXE2 369 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 VENTXO95231 258 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 HBZP02008 142 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CRYAAP02489 173 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 EGR1P18146 543 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 SERF2P84101 59 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 GALMQ96C23 342 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CHD3Q12873 2000 aaKnown RBP9.63□□□□□ -0.87
USP35-207ENST00000530546 DEFB108AA8MXU0 73 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.63□□□□□ -0.87
USP35-207ENST00000530546 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 SSTR5P35346 364 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 SMIM21Q3B7S5 101 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 TMEM41BQ5BJD5 291 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 MBNL2Q5VZF2 373 aaKnown RBP9.63□□□□□ -0.87
USP35-207ENST00000530546 Q6ZRM9 215 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 DRAM1Q8N682 238 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 SCGB1C1Q8TD33 95 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CACNG5Q9UF02 275 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 TRAPPC1Q9Y5R8 145 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 DMXL2Q8TDJ6 3036 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CEP295Q9C0D2 2601 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 IFNL4K9M1U5 179 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CCL25O15444 150 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 CIDEAO60543 219 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ZNF737O75373 536 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ESDP10768 282 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 TFPI2P48307 235 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ATP6V1FQ16864 119 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 C22orf34Q6ZV56 151 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 SMIM15Q7Z3B0 74 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 TMEM256Q8N2U0 113 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 OR4B1Q8NGF8 309 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
USP35-207ENST00000530546 CIB3Q96Q77 187 aaPredicted RBP9.63□□□□□ -0.87
USP35-207ENST00000530546 OR2D2Q9H210 308 aa9.63□□□□□ -0.87
USP35-207ENST00000530546 ATMQ13315 3056 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 DIDO1Q9BTC0 2240 aaKnown RBP9.62□□□□□ -0.87
USP35-207ENST00000530546 IAPPP10997 89 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 TIMM23BQ5SRD1 257 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 CD177Q8N6Q3 437 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 NPIPB11E5RHQ5 1161 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 TOMM40O96008 361 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 PPBPP02775 128 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 CD99P14209 185 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 FGF8P55075 233 aaPredicted RBP9.62□□□□□ -0.87
USP35-207ENST00000530546 UBE2V1Q13404 147 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 FAM201AQ5SY85 155 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 MOGAT3Q86VF5 341 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 NINJ1Q92982 152 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 FAM122AQ96E09 287 aa9.62□□□□□ -0.87
USP35-207ENST00000530546 IGKV1-5P01602 117 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 PRDX2P32119 198 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 TMEM267Q0VDI3 215 aaPredicted RBP9.61□□□□□ -0.87
USP35-207ENST00000530546 PRSS8Q16651 343 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms