RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 LSM10Q969L4 123 aaKnown RBP6.18□□□□□ -1.42
CTNND1-218ENST00000528232 TMEM140Q9NV12 185 aa6.18□□□□□ -1.42
CTNND1-218ENST00000528232 KNTC1P50748 2209 aa6.18□□□□□ -1.42
CTNND1-218ENST00000528232 NLRC5Q86WI3 1866 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 FAM157CP0CG43 387 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 UCP3P55916 312 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 SELENOTP62341 195 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 CDCP2Q5VXM1 449 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 TDRD6O60522 2096 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 TRBV24-1A0A075B6N3 115 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 IGHV1-69-2A0A0G2JMI3 117 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 FAM90A26D6RGX4 464 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 UMODP07911 640 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 SCTP09683 121 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 HSD52Q0P140 79 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 OR9G4Q8NGQ1 327 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 PLPPR1Q8TBJ4 325 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BLQ99880 126 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 SLC25A2Q9BXI2 301 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 C5orf66Q9H5L9 145 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 LOC101059948A0A1B0GTJ6 334 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 COLCA2A8K830 154 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 C17orf51A8MQB3 221 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 H0YL77 283 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 J3QRE1 110 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 MFAP2P55001 183 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 UCNP55089 124 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 Q5BKY6 102 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 C10orf113Q5VZT2 155 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 SELENOHQ8IZQ5 122 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 FLYWCH2Q96CP2 140 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 ABHD14AQ9BUJ0 271 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 QTRT1Q9BXR0 403 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 GP6Q9HCN6 339 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 DOCK6Q96HP0 2047 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 PTPRDP23468 1912 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 PGLYRP1O75594 196 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 IGHV2-70P01814 119 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 MC5RP33032 325 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 NRN1LQ496H8 165 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 OR10J3Q5JRS4 329 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 ASCL4Q6XD76 172 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 LPAR2Q9HBW0 351 aa6.17□□□□□ -1.42
CTNND1-218ENST00000528232 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 MRPS18CQ9Y3D5 142 aaKnown RBP6.17□□□□□ -1.42
CTNND1-218ENST00000528232 H2BFSP57053 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 ZNF841Q6ZN19 808 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 ZNF441Q8N8Z8 693 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 TMEM190Q8WZ59 177 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 C19orf24Q9BVV8 132 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 TM2D1Q9BX74 207 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 MAP1BP46821 2468 aaKnown RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 NKX2-8O15522 239 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 TEPPQ6URK8 271 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HARBI1Q96MB7 349 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 PIMREGQ9BSJ6 248 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 PPIAL4EA0A075B759 164 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 PPIAL4DF5H284 164 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 IFNL4K9M1U5 179 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 SYNGR3O43761 229 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 PPIAL4FP0DN26 164 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 SSBP2P81877 361 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 MRPL14Q6P1L8 145 aaKnown RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 OR1L8Q8NGR8 309 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 ZNF703Q9H7S9 590 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 DLL3Q9NYJ7 618 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 PPIAL4AQ9Y536 164 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 A0A0G2JMM0 328 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 A0A1W2PPB8 328 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 KIR3DP1A8MWS1 328 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 APOMO95445 188 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 OR4A8P0C604 315 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 RELBQ01201 579 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 TMEM187Q14656 261 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 GBGT1Q8N5D6 347 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 IGLV3-32A0A0A0MS00 114 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 K7N7A8 449 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 IGFBP3P17936 291 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 SRIP30626 198 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 ASPHD2Q6ICH7 369 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 MORN3Q6PF18 240 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 TMEM252Q8N6L7 170 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms