RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IGHV3-23P01764 117 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 FGF9P31371 208 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 DEFB114Q30KQ6 69 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 ADAMTSL5Q6ZMM2 481 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 SSX9Q7RTT3 188 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 MRPS14O60783 128 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 DHFRP00374 187 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 HRASP01112 189 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 IL6RP08887 468 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 CD7P09564 240 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 FOLR2P14207 255 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 MAS1LP35410 378 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 KIR2DS2P43631 304 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 ARPC4P59998 168 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 LAX1Q8IWV1 398 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 DEFB125Q8N687 156 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 TMEM167AQ8TBQ9 72 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 RETNQ9HD89 108 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 SLC2A9Q9NRM0 540 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 S4R3C0 116 aa16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 DYNC2H1Q8NCM8 4307 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-208ENST00000527680 ZNF320A2RRD8 509 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 C2orf70A6NJV1 201 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 OR11H12B2RN74 326 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 TEX22C9J3V5 150 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 SSX5O60225 188 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 UBE2UQ5VVX9 321 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 CLEC19AQ6UXS0 136 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 ZNF66Q6ZN08 573 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 C19orf35Q6ZS72 473 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 SPARTQ8N0X7 666 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 LGALS14Q8TCE9 139 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 SECTM1Q8WVN6 248 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 GPHA2Q96T91 129 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 FAM110AQ9BQ89 295 aa16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 TECRQ9NZ01 308 aaKnown RBP16.91■□□□□ 0.3
TRAPPC4-208ENST00000527680 NPIPB5A8MRT5 1133 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 E7EUB6 86 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 TNFSF12O43508 249 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 NDUFB8O95169 186 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 DEFA4P12838 97 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 ARL3P36405 182 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 FAM106AQ4KMX7 169 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 SFXN4Q6P4A7 337 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 PUSL1Q8N0Z8 303 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 HIPK2Q9H2X6 1198 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 RHBDL2Q9NX52 303 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 SELENOKQ9Y6D0 94 aa16.9■□□□□ 0.3
TRAPPC4-208ENST00000527680 TRAV18A0A075B6X5 111 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 ZNF735P0CB33 412 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 AREGP15514 252 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 EDN2P20800 178 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 PSMB6P28072 239 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 FCGR2CP31995 323 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 RPL8P62917 257 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 MXD1Q05195 221 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 GPHB5Q86YW7 130 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 BEST4Q8NFU0 473 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 IL17DQ8TAD2 202 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 FCGR1BQ92637 280 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 EEF1AKMT3Q96AZ1 226 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 AIFM2Q9BRQ8 373 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 SRD5A3Q9H8P0 318 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 HRASLSQ9HDD0 168 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 CCL28Q9NRJ3 127 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 DMRT1Q9Y5R6 373 aa16.89■□□□□ 0.29
TRAPPC4-208ENST00000527680 LGALS9O00182 355 aa16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 CBLN1P23435 193 aa16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 SDC2P34741 201 aa16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 BRWD1-AS2P59051 145 aa16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 LINC00322Q6ZN03 302 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 WDR89Q96FK6 387 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 FANCD2OSQ96PS1 177 aa16.88■□□□□ 0.29
TRAPPC4-208ENST00000527680 RBMY1BA6NDE4 496 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 RBMY1EA6NEQ0 496 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 REG1AP05451 166 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 RBMY1DP0C7P1 496 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 PTHLHP12272 177 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 HIST1H1BP16401 226 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 EIF4EBP1Q13541 118 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 IDNKQ5T6J7 187 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 SLC16A13Q7RTY0 426 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 SPAG16Q8N0X2 631 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 WFDC10AQ9H1F0 79 aa16.87■□□□□ 0.29
TRAPPC4-208ENST00000527680 FCER2P06734 321 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 CRYGCP07315 174 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 MYOD1P15172 320 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 HLA-GP17693 338 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 ZNF57Q68EA5 555 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 GVQW1Q8N7I0 195 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 OR13F1Q8NGS4 319 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 CACNG8Q8WXS5 425 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 SLC5A7Q9GZV3 580 aa16.86■□□□□ 0.29
TRAPPC4-208ENST00000527680 A0A1B0GW64 132 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 CLEC2LP0C7M8 214 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 CTRB1P17538 263 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 FXYD4P59646 89 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 CTRB2Q6GPI1 263 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 OR4A47Q6IF82 309 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms