RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ZNF256Q9Y2P7 627 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 FAM223BA6NKX1 122 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 SULT1C2O00338 296 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 FCER2P06734 321 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 FGF2P09038 288 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 TAS2R31P59538 309 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 FAM223AQ8IWN6 122 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 SPAG16Q8N0X2 631 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 GPX8Q8TED1 209 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 MOB3AQ96BX8 217 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 ELOVL1Q9BW60 279 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 BET1LQ9NYM9 111 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 COL7A1Q02388 2944 aa14.19□□□□□ -0.14
TSPAN4-216ENST00000526055 TRBV9A0A0B4J1U6 114 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 TNFSF12O43508 249 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 SAP30O75446 220 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 TPPPO94811 219 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 HPRT1P00492 218 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 GNRHRP30968 328 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 POU2AF1Q16633 256 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF818PQ6ZRF7 136 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 TMEM17Q86X19 198 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 VKORC1L1Q8N0U8 176 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 OR6Q1Q8NGQ2 317 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF2Q9BSG1 426 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 PEF1Q9UBV8 284 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF257Q9Y2Q1 563 aa14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-216ENST00000526055 SORL1Q92673 2214 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 NQO2P16083 231 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF182P17025 639 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 RPL27AP46776 148 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 RFX2P48378 723 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 RPL8P62917 257 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 OR6F1Q8NGZ6 308 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 OR4C12Q96R67 309 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 PLEKHA2Q9HB19 425 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 COMMD9Q9P000 198 aa14.17□□□□□ -0.14
TSPAN4-216ENST00000526055 NPIPB5A8MRT5 1133 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 TEX22C9J3V5 150 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 PMP2P02689 132 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF735P0CB33 412 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 APELAP0DMC3 54 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 ELK1P19419 428 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 RCVRNP35243 200 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 RHOGP84095 191 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 CD69Q07108 199 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 KLF5Q13887 457 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 TATDN3Q17R31 274 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 C10orf55Q5SWW7 151 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 AADACL3Q5VUY0 350 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 LYSMD2Q8IV50 215 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 NECAP1Q8NC96 275 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 ISOC1Q96CN7 298 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 PRR25Q96S07 402 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 GPHA2Q96T91 129 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 SLC2A9Q9NRM0 540 aa14.16□□□□□ -0.14
TSPAN4-216ENST00000526055 CCDC160A6NGH7 325 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 HPGDSO60760 199 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 HLA-GP17693 338 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 HRH1P35367 487 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 SPCS2Q15005 226 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 OR4A47Q6IF82 309 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 CADM3Q8N126 398 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 OR51H1Q8NH63 302 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 C15orf40Q8WUR7 153 aa14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 SRSF8Q9BRL6 282 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-216ENST00000526055 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 DPPA5A6NC42 116 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 H3BMQ9 156 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 PGLYRP1O75594 196 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 DHFRP00374 187 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 CRYGCP07315 174 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 IL6RP08887 468 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 ATP5G2Q06055 141 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 SSX9Q7RTT3 188 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 SNX29P2Q8IUI4 249 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 HRASLSQ9HDD0 168 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 AKIP1Q9NQ31 210 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 CEPT1Q9Y6K0 416 aa14.14□□□□□ -0.15
TSPAN4-216ENST00000526055 FAM25AB3EWG3 89 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 FAM25CB3EWG5 89 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 FAM25GB3EWG6 89 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 GPR31O00270 319 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 LY86O95711 162 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 NHLRC4P0CG21 123 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 F2RP25116 425 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 HLA-DMAP28067 261 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 S100GP29377 79 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 TSPAN5P62079 268 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 ZNF45Q02386 682 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 RPEL1Q2QD12 228 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 THOC7Q6I9Y2 204 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 OR9G4Q8NGQ1 327 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 FYTTD1Q96QD9 318 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 FAM212BQ9NTI7 297 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms