RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 VKORC1L1Q8N0U8 176 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 DCUN1D4Q92564 292 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 MOB3AQ96BX8 217 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
NR1H3-228ENST00000525441 ZNF2Q9BSG1 426 aaPredicted RBP13.55□□□□□ -0.24
NR1H3-228ENST00000525441 TINAGL1Q9GZM7 467 aaPredicted RBP13.55□□□□□ -0.24
NR1H3-228ENST00000525441 IGHV4OR15-8A0A075B7B6 117 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 A0A087WW49 117 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 K7EIL1 84 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 SULT1C2O00338 296 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 KBTBD11O94819 623 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 RCVRNP35243 200 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 MAS1LP35410 378 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
NR1H3-228ENST00000525441 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 PUSL1Q8N0Z8 303 aaKnown RBP13.54□□□□□ -0.24
NR1H3-228ENST00000525441 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 TMEM167AQ8TBQ9 72 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 USMG5Q96IX5 58 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 ADAM30Q9UKF2 790 aa13.54□□□□□ -0.24
NR1H3-228ENST00000525441 WI2-2373I1.2A0A1W2PRP0 233 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 APELAP0DMC3 54 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 HLA-DMAP28067 261 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 HRH1P35367 487 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 SLURP1P55000 103 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 SLC25A42Q86VD7 318 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 CMTM1Q8IZ96 169 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 ADAD2Q8NCV1 583 aaKnown RBP13.53□□□□□ -0.24
NR1H3-228ENST00000525441 OR51H1Q8NH63 302 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 DLX4Q92988 240 aaPredicted RBP13.53□□□□□ -0.24
NR1H3-228ENST00000525441 RANGRFQ9HD47 186 aaPredicted RBP13.53□□□□□ -0.24
NR1H3-228ENST00000525441 PTTG2Q9NZH5 202 aa13.53□□□□□ -0.24
NR1H3-228ENST00000525441 TPPPO94811 219 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 HPRT1P00492 218 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 ZP3P21754 424 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 GNRHRP30968 328 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 RPL27AP46776 148 aaKnown RBP13.52□□□□□ -0.25
NR1H3-228ENST00000525441 TAS2R31P59538 309 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 TSPAN5P62079 268 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 ZNF429Q86V71 674 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 LYSMD2Q8IV50 215 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 C15orf40Q8WUR7 153 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 BET1LQ9NYM9 111 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 DNAH3Q8TD57 4116 aa13.52□□□□□ -0.25
NR1H3-228ENST00000525441 NQO2P16083 231 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 S100GP29377 79 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 ECI1P42126 302 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
NR1H3-228ENST00000525441 C10orf55Q5SWW7 151 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 LPCAT3Q6P1A2 487 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 TTC9CQ8N5M4 171 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
NR1H3-228ENST00000525441 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 HRASLSQ9HDD0 168 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
NR1H3-228ENST00000525441 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 GPR31O00270 319 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 CTDSP2O14595 271 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 OR4A47Q6IF82 309 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 FYTTD1Q96QD9 318 aaKnown RBP13.5□□□□□ -0.25
NR1H3-228ENST00000525441 MIXL1Q9H2W2 232 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 COMMD9Q9P000 198 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
NR1H3-228ENST00000525441 ANKRD34BA5PLL1 514 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 RGS5O15539 181 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 SAP30O75446 220 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 PGLYRP1O75594 196 aaPredicted RBP13.49□□□□□ -0.25
NR1H3-228ENST00000525441 RLN1P04808 185 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 HLA-GP17693 338 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 ERVK-16P61578 105 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 RHOGP84095 191 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 POU2AF1Q16633 256 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 ZNF343Q6P1L6 599 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 ELOVL1Q9BW60 279 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 FXYD6Q9H0Q3 95 aa13.49□□□□□ -0.25
NR1H3-228ENST00000525441 PEF1Q9UBV8 284 aaKnown RBP13.49□□□□□ -0.25
NR1H3-228ENST00000525441 HMX3A6NHT5 357 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 NPIPB5A8MRT5 1133 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 IFNA6P05013 189 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 IL6RP08887 468 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-228ENST00000525441 ZNF735P0CB33 412 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 F2RP25116 425 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 ATP5G2Q06055 141 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 ACSM6Q6P461 480 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 NECAP1Q8NC96 275 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 OR6Q1Q8NGQ2 317 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 OR4C12Q96R67 309 aa13.48□□□□□ -0.25
NR1H3-228ENST00000525441 SLC2A9Q9NRM0 540 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms