RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 S100PBPQ96BU1 408 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 MGST2Q99735 147 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 MS4A5Q9H3V2 200 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 ASCL3Q9NQ33 180 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 DSCAML1Q8TD84 2053 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 TMPRSS2O15393 492 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 SLC31A2O15432 143 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 TYMSP04818 313 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 KIR2DS2P43631 304 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 SEM1Q6ZVN7 128 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 PIP4P1Q86T03 277 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 MOGAT3Q86VF5 341 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 ABHD12Q8N2K0 398 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 DDB2Q92466 427 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 DSCAMO60469 2012 aa9.15□□□□□ -0.94
HDAC9-228ENST00000524023 XKRY2A2RUG3 117 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 F6UZH7 168 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 NDUFB4O95168 129 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 AMBPP02760 352 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 CGB3P0DN86 165 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 CGB7P0DN87 165 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 CHRNA7P36544 502 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF83P51522 516 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 ACTL10Q5JWF8 245 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 UTF1Q5T230 341 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 PXMP4Q9Y6I8 212 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 TRGV8A0A0C4DH27 118 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 MBD3L4A6NDZ8 208 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 MBD3L3A6NE82 208 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 MBD3L5A6NJ08 208 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 DVL1O14640 695 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 LHBP01229 141 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 FTH1P19P0C7X4 201 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 CD99P14209 185 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 NUBP1P53384 320 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 CISD2Q8N5K1 135 aaKnown RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 OR4S2Q8NH73 311 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 MBD3L2Q8NHZ7 208 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 RNASEH2CQ8TDP1 164 aaKnown RBP9.14□□□□□ -0.95
HDAC9-228ENST00000524023 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 ACY3Q96HD9 319 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
HDAC9-228ENST00000524023 M0R1B8 84 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 ITGB1BP1O14713 200 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 PDLIM4P50479 330 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 RAB7AP51149 207 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 DEFA6Q01524 100 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 DEFB109BQ30KR1 87 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 DEFB124Q8NES8 71 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 OR5R1Q8NH85 324 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 TMEM37Q8WXS4 190 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 SDSLQ96GA7 329 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 AURKAIP1Q9NWT8 199 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-228ENST00000524023 LSM4Q9Y4Z0 139 aaKnown RBP9.13□□□□□ -0.95
HDAC9-228ENST00000524023 CACNA1HO95180 2353 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 TANC2Q9HCD6 1990 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 SPAARA0A1B0GVQ0 90 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 C15orf61A6NNL5 157 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 SPRY3O43610 288 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 CXorf1O96002 111 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 SELLP14151 372 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 GLRXP35754 106 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 GPX4P36969 197 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-228ENST00000524023 KLF3P57682 345 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-228ENST00000524023 PKIAP61925 76 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 LCN2P80188 198 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-228ENST00000524023 CT45A1Q5HYN5 189 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 CT45A3Q8NHU0 189 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 ITLN1Q8WWA0 313 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 NCOR1P1Q9H4R4 102 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 NPVFQ9HCQ7 196 aa9.13□□□□□ -0.95
HDAC9-228ENST00000524023 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 C1QTNF9P0C862 333 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-228ENST00000524023 IL3RAP26951 378 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 TIMM23BQ5SRD1 257 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 FAM201AQ5SY85 155 aa9.12□□□□□ -0.95
HDAC9-228ENST00000524023 ZNF474Q6S9Z5 364 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms