RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 TNFAIP8L2Q6P589 184 aaPredicted RBP0.58□□□□□ -2.32
PCM1-217ENST00000522998 RASSF6Q6ZTQ3 369 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 KTN1-AS1Q86SY8 53 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 NAA40Q86UY6 237 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 SGMS2Q8NHU3 365 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 C10orf105Q8TEF2 133 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 Q96M85 177 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 KCTD7Q96MP8 289 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 IMMP2LQ96T52 175 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 XAGE1AQ9HD64 81 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 POLR1DQ9Y2S0 133 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 TIMM9Q9Y5J7 89 aa0.58□□□□□ -2.32
PCM1-217ENST00000522998 KIF15Q9NS87 1388 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 SMARCA4P51532 1647 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 RALGAPA2Q2PPJ7 1873 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 SCAF11Q99590 1463 aaKnown RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 A0A0D9SEW6 157 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 TRBV6-5A0A0K0K1A5 114 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 LINC00854A0A1B0GVQ3 168 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 COCHO43405 550 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 CREBL2O60519 120 aaPredicted RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 MRPS14O60783 128 aaKnown RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 GPX2P18283 190 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 AKR1C3P42330 323 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 SLCO1A2P46721 670 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 RPL28P46779 137 aaKnown RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 CD151P48509 253 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 CDC34P49427 236 aaPredicted RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 EVX1P49640 407 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 RAB14P61106 215 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 HIST1H4AP62805 103 aaKnown RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 TNFAIP6P98066 277 aaPredicted RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 Q1T7F1 81 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 TNFAIP8L3Q5GJ75 292 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 C1orf194Q5T5A4 169 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 PDPK2PQ6A1A2 396 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 ZNF705AQ6ZN79 300 aaPredicted RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 RPP25LQ8N5L8 163 aaKnown RBP0.57□□□□□ -2.32
PCM1-217ENST00000522998 UBL4BQ8N7F7 174 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 C9orf163Q8N9P6 203 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 TMEM161BQ8NDZ6 487 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 EEF1AKMT1Q8WVE0 214 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 CMTM5Q96DZ9 223 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 CHST6Q9GZX3 395 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 HRASLSQ9HDD0 168 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 AK3Q9UIJ7 227 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 PRELID1Q9Y255 219 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 COQ4Q9Y3A0 265 aa0.57□□□□□ -2.32
PCM1-217ENST00000522998 MAST2Q6P0Q8 1798 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 TRAPPC13A5PLN9 417 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 OR51F1A6NGY5 319 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 HMSDA8MTL9 139 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 DISC1C4P0D8 188 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 GOLGA8KD6RF30 607 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 GOLGA8MH3BSY2 632 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 SSNA1O43805 119 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 TFPTP0C1Z6 253 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 CCL1P22362 96 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 POLR2GP62487 172 aaKnown RBP eCLIP0.56□□□□□ -2.32
PCM1-217ENST00000522998 NNATQ16517 81 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 SLC36A2Q495M3 483 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 CST9Q5W186 159 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 FP248Q71RG6 208 aaPredicted RBP0.56□□□□□ -2.32
PCM1-217ENST00000522998 UMODL1-AS1Q8N2C9 162 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 SLC22A24Q8N4F4 322 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 TMEM156Q8N614 296 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 OR2T27Q8NH04 317 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 MBD3L1Q8WWY6 194 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 TMA16Q96EY4 203 aaKnown RBP0.56□□□□□ -2.32
PCM1-217ENST00000522998 GPR84Q9NQS5 396 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 MED9Q9NWA0 146 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 RSL24D1Q9UHA3 163 aaKnown RBP0.56□□□□□ -2.32
PCM1-217ENST00000522998 DKKL1Q9UK85 242 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 CFAP45Q9UL16 551 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 ANAPC10Q9UM13 185 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 SOX21Q9Y651 276 aaPredicted RBP0.56□□□□□ -2.32
PCM1-217ENST00000522998 ABCC11Q96J66 1382 aa0.56□□□□□ -2.32
PCM1-217ENST00000522998 CCDC88AQ3V6T2 1871 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 IGKV1D-43A0A0B4J1Z2 117 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 TRAV38-1A0A0B4J264 116 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 IGKV3D-7A0A0C4DH55 119 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 IGKV3OR2-268A0A0C4DH90 116 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 IGHV1-69-2A0A0G2JMI3 117 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 H3BT86 120 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 LST1O00453 97 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 NSA2O95478 260 aaKnown RBP0.55□□□□□ -2.32
PCM1-217ENST00000522998 MSMBP08118 114 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 AQP4P55087 323 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 RPL30P62888 115 aaKnown RBP0.55□□□□□ -2.32
PCM1-217ENST00000522998 MLLT11Q13015 90 aaPredicted RBP0.55□□□□□ -2.32
PCM1-217ENST00000522998 PPP1R1AQ13522 171 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 MOGQ16653 247 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 ARHGAP11BQ3KRB8 267 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 C5orf46Q6UWT4 87 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 C7orf65Q6ZTY9 151 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 SSX8Q7RTT4 187 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 SLC36A1Q7Z2H8 476 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 ZNF550Q7Z398 422 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 DCXRQ7Z4W1 244 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 FAM9CQ8IZT9 166 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms