RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 A0A0J9YW62 118 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 HMSDA8MTL9 139 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 TGOLN2O43493 480 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 ZNF737O75373 536 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 TNNC2P02585 160 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 C1QCP02747 245 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 FAM228BP0C875 321 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 ZNF705DP0CH99 300 aaPredicted RBP0.95□□□□□ -2.26
SKP1-207ENST00000520417 ZNF705BP0CI00 300 aaPredicted RBP0.95□□□□□ -2.26
SKP1-207ENST00000520417 LYNX1P0DP58 116 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 PSMB8P28062 276 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 REG1BP48304 166 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 TPI1P60174 286 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 CXCR4P61073 352 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 RPL30P62888 115 aaKnown RBP0.95□□□□□ -2.26
SKP1-207ENST00000520417 BATFQ16520 125 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 CDKL4Q5MAI5 379 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 CCDC122Q5T0U0 273 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 C1orf195Q5TG92 126 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 FAM78BQ5VT40 261 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 SBSNQ6UWP8 590 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 LRRN1Q6UXK5 716 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 SLC36A1Q7Z2H8 476 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 GPHB5Q86YW7 130 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 TMEM156Q8N614 296 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 UBL4BQ8N7F7 174 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 EEF1AKMT1Q8WVE0 214 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 CCL13Q99616 98 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 HRASLSQ9HDD0 168 aa0.95□□□□□ -2.26
SKP1-207ENST00000520417 NYNRINQ9P2P1 1898 aaKnown RBP0.95□□□□□ -2.26
SKP1-207ENST00000520417 COL4A1P02462 1669 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 RP1L1Q8IWN7 2480 aaPredicted RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 TRAV38-1A0A0B4J264 116 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 TRBV6-5A0A0K0K1A5 114 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 H3BT86 120 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 CXCR6O00574 342 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 COX7A2LO14548 114 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 NIPSNAP2O75323 286 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 HLA-DRAP01903 254 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 CRPP02741 224 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 ISG15P05161 165 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 SERPINA7P05543 415 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 C8orf88P0DMB2 117 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 AKR1C3P42330 323 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 HAAOP46952 286 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 FKBP1AP62942 108 aaKnown RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 FABP9Q0Z7S8 132 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 C9orf64Q5T6V5 341 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 PTRHD1Q6GMV3 140 aaKnown RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 TBC1D19Q8N5T2 526 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 JOSD2Q8TAC2 188 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 GNPNAT1Q96EK6 184 aaPredicted RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 DIRAS2Q96HU8 199 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 ERMAPQ96PL5 475 aaPredicted RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 HSPB9Q9BQS6 159 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 GPR84Q9NQS5 396 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 NAT8Q9UHE5 227 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 C3orf18Q9UK00 162 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 LSM5Q9Y4Y9 91 aaKnown RBP0.94□□□□□ -2.26
SKP1-207ENST00000520417 PXMP4Q9Y6I8 212 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 NUP160Q12769 1436 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 MED13Q9UHV7 2174 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 SLX4Q8IY92 1834 aa0.94□□□□□ -2.26
SKP1-207ENST00000520417 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 EVC2Q86UK5 1308 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 DSCAMO60469 2012 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 IGHV1-18A0A0C4DH31 117 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 A0A1B0GW54 56 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 SMIM23A6NLE4 172 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 H7C2G1 150 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 DCTN3O75935 186 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 APOMO95445 188 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 PPBPP02775 128 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 CALB1P05937 261 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 LGALS1P09382 135 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 DEFA4P12838 97 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 GPX2P18283 190 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 MSNP26038 577 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 CCR7P32248 378 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 AP2S1P53680 142 aaPredicted RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 HIST1H4AP62805 103 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 LRRC75BQ2VPJ9 315 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 C1orf194Q5T5A4 169 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 C8orf74Q6P047 294 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 C10orf67Q8IYJ2 551 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 TMEM161BQ8NDZ6 487 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 HAVCR2Q8TDQ0 301 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 C10orf105Q8TEF2 133 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 ACOT12Q8WYK0 555 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 Q96M85 177 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 OR51I2Q9H344 312 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 UBAP1Q9NZ09 502 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 RBM7Q9Y580 266 aaKnown RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 SOX21Q9Y651 276 aaPredicted RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 V9GYY5 206 aaPredicted RBP0.93□□□□□ -2.26
SKP1-207ENST00000520417 THSD7AQ9UPZ6 1657 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 ABCC11Q96J66 1382 aa0.93□□□□□ -2.26
SKP1-207ENST00000520417 KIAA2026Q5HYC2 2103 aa0.92□□□□□ -2.26
SKP1-207ENST00000520417 TRAV7A0A075B6U4 112 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms