RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FAM166BA8MTA8 275 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 SLC17A3O00476 420 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 OR9G9P0C7N8 305 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 SPINK2P20155 84 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 PCP4P48539 62 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 MCEMP1Q8IX19 187 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 KLHDC1Q8N7A1 406 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 MS4A5Q9H3V2 200 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 NRN1Q9NPD7 142 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 B4GALT7Q9UBV7 327 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 SLC25A10Q9UBX3 287 aaPredicted RBP14.74□□□□□ -0.05
NUP54-205ENST00000507257 TBL2Q9Y4P3 447 aaKnown RBP14.74□□□□□ -0.05
NUP54-205ENST00000507257 PI4KAP42356 2102 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 TRGV8A0A0C4DH27 118 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 F2Z2F3 143 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 TNFSF15O95150 251 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 CCL4P13236 92 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 HTD2P86397 168 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 SPINK9Q5DT21 86 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 MIC13Q5XKP0 118 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 TRAT1Q6PIZ9 186 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 C19orf35Q6ZS72 473 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 BCL2L2Q92843 193 aaPredicted RBP14.74□□□□□ -0.05
NUP54-205ENST00000507257 RNF114Q9Y508 228 aa14.74□□□□□ -0.05
NUP54-205ENST00000507257 IQCF6A8MYZ5 107 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 FNDC10F2Z333 226 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 K7ESF4 209 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 GFRA3O60609 400 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 PRRX1P54821 245 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 KRTDAPP60985 99 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 BATFQ16520 125 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 TBC1D28Q2M2D7 210 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 TMEM136Q6ZRR5 245 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 TIPARPQ7Z3E1 657 aaKnown RBP14.73□□□□□ -0.05
NUP54-205ENST00000507257 ST6GALNAC3Q8NDV1 305 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 COQ2Q96H96 371 aa14.73□□□□□ -0.05
NUP54-205ENST00000507257 HLA-DQA1P01909 254 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 ADH4P08319 380 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 SRYQ05066 204 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 EFNB3Q15768 340 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 STARD4Q96DR4 205 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 MRPS16Q9Y3D3 137 aaKnown RBP14.72□□□□□ -0.05
NUP54-205ENST00000507257 A0A1W2PS18 150 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 AQP7O14520 342 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 HYPMO75409 117 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 ZNF324O75467 553 aaPredicted RBP14.72□□□□□ -0.05
NUP54-205ENST00000507257 SP1P08047 785 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 DUTP33316 252 aaKnown RBP14.72□□□□□ -0.05
NUP54-205ENST00000507257 AMTP48728 403 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 FOXF2Q12947 444 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 MMDQ15546 238 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 LYSMD4Q5XG99 296 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 MDP1Q86V88 176 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 OR8I2Q8N0Y5 310 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 ARL6IP6Q8N6S5 226 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 C1orf159Q96HA4 380 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 NAT8BQ9UHF3 227 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 LAMTOR2Q9Y2Q5 125 aa14.72□□□□□ -0.05
NUP54-205ENST00000507257 SMPD2O60906 423 aa14.71□□□□□ -0.05
NUP54-205ENST00000507257 NDUFB8O95169 186 aa14.71□□□□□ -0.05
NUP54-205ENST00000507257 HNF1AP20823 631 aa14.71□□□□□ -0.05
NUP54-205ENST00000507257 MRPL49Q13405 166 aaKnown RBP14.71□□□□□ -0.05
NUP54-205ENST00000507257 OR4A16Q8NH70 328 aa14.71□□□□□ -0.05
NUP54-205ENST00000507257 HEYLQ9NQ87 328 aaPredicted RBP14.71□□□□□ -0.05
NUP54-205ENST00000507257 MRPL27Q9P0M9 148 aaKnown RBP14.71□□□□□ -0.05
NUP54-205ENST00000507257 ISLRO14498 428 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 TOMM40O96008 361 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 OTX2P32243 289 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 TFPI2P48307 235 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 HNRNPA3P51991 378 aaKnown RBP14.7□□□□□ -0.06
NUP54-205ENST00000507257 AESQ08117 197 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 SSPNQ14714 243 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 PRAMEF5Q5TYX0 476 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 PRAMEF6Q5VXH4 476 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 OR5B3Q8NH48 314 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 TMEM167BQ9NRX6 74 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 SDK1Q7Z5N4 2213 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 C20orf202A1L168 122 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 TCF21O43680 179 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 AMY1AP04745 511 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 GNG4P50150 75 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 KLF3P57682 345 aaPredicted RBP14.7□□□□□ -0.06
NUP54-205ENST00000507257 RAB31Q13636 194 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 PMCHL1Q16048 86 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 MORN2Q502X0 79 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 FAM53AQ6NSI3 398 aaPredicted RBP14.7□□□□□ -0.06
NUP54-205ENST00000507257 RASL11AQ6T310 242 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 TEPPQ6URK8 271 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 GCNT2Q8N0V5 402 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 STPG4Q8N801 248 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 CORO2AQ92828 525 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 IL19Q9UHD0 177 aa14.7□□□□□ -0.06
NUP54-205ENST00000507257 ZNF83P51522 516 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 PRR20EP86478 221 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 PRR20CP86479 221 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 PRR20DP86480 221 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 PRR20BP86481 221 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 PRR20AP86496 221 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 RELBQ01201 579 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 NIT1Q86X76 327 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms