RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 HLA-DRB1P01911 266 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 CTSGP08311 255 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 SNRPD2P62316 118 aaKnown RBP3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 GUK1Q16774 197 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 LIN52Q52LA3 116 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 LPCAT3Q6P1A2 487 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 KRT222Q8N1A0 295 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 ACOT12Q8WYK0 555 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 ZNF391Q9UJN7 358 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 ARL5AQ9Y689 179 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 NCOA1Q15788 1441 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 TMEM235A6NFC5 223 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 OR4C46A6NHA9 309 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 NPYP01303 97 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 SERPINA7P05543 415 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 PPP1R2P41236 205 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 MAGEA12P43365 314 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 RPL5P46777 297 aaKnown RBP3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 AP1S1P61966 158 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 AKR1C1Q04828 323 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 KCNJ8Q15842 424 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 PPP1R2P3Q6NXS1 205 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 C2orf91Q6ZV80 131 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 FGF13Q92913 245 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 PAQR5Q9NXK6 330 aaPredicted RBP3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 MMACHCQ9Y4U1 282 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 MINOS1-NBL1R4GNA1 71 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 CHD5Q8TDI0 1954 aa3.29□□□□□ -1.88
AP001960.1-201ENST00000506494 WRNQ14191 1432 aaPredicted RBP eCLIP3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 TRBV20OR9-2A0A075B6H5 130 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 I3L521 148 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 CRYZL1O95825 349 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 BLVRBP30043 206 aaPredicted RBP3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 S100A7P31151 101 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 CSN1S1P47710 185 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 XCL1P47992 114 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 TAF1AQ15573 450 aaPredicted RBP3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 SSX8Q7RTT4 187 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 S100A7AQ86SG5 101 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 CLDND2Q8NHS1 167 aa3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 ZNF638Q14966 1978 aaKnown RBP3.28□□□□□ -1.88
AP001960.1-201ENST00000506494 NUP160Q12769 1436 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 IGLV10-54A0A075B6I4 117 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 IGHV3-15A0A0B4J1V0 119 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 FAAHO00519 579 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 HACD4Q5VWC8 232 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 Q6ZS49 121 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 MCFD2Q8NI22 146 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 KLF6Q99612 283 aaPredicted RBP3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 TTTY13Q9BZ97 58 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 RSL24D1Q9UHA3 163 aaKnown RBP3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 CCDC144AA2RUR9 1427 aa3.27□□□□□ -1.89
AP001960.1-201ENST00000506494 MTUS2Q5JR59 1369 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 DHX57Q6P158 1386 aaKnown RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 A0A0J9YX75 114 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 A0A0J9YY10 115 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 A0A1B0GX78 115 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 A0A1W2PQD3 144 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 E7EQL1 145 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 PDE6DO43924 150 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 OR2B3O76000 313 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 OR7C1O76099 320 aaPredicted RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 UCHL1P09936 223 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 CD24P25063 80 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 IAH1Q2TAA2 248 aaPredicted RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 SLC35F6Q8N357 371 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 PXT1Q8NFP0 134 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 OR8B12Q8NGG6 310 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 OR10X1Q8NGY0 326 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 ZNF675Q8TD23 568 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 C9orf16Q9BUW7 83 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 TMEM147Q9BVK8 224 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 FAM32AQ9Y421 112 aaKnown RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 TRPM3Q9HCF6 1732 aaPredicted RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 CACNA1DQ01668 2161 aa3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 DICER1Q9UPY3 1922 aaKnown RBP3.26□□□□□ -1.89
AP001960.1-201ENST00000506494 ABCC12Q96J65 1359 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 SHANK1Q9Y566 2161 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 TTC21AQ8NDW8 1320 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 TRAV26-2A0A0B4J265 109 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 MDFIC2A0A1B0GVS7 189 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 CST2P09228 141 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 OR51A2Q8NGJ7 313 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 OR4C16Q8NGL9 310 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 OR4X1Q8NH49 305 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 MRPL30Q8TCC3 161 aaKnown RBP3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 ENY2Q9NPA8 101 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 IDI2-AS1Q9NZ38 188 aa3.25□□□□□ -1.89
AP001960.1-201ENST00000506494 NLRC5Q86WI3 1866 aa3.24□□□□□ -1.89
AP001960.1-201ENST00000506494 IGKV3D-11A0A0A0MRZ8 115 aa3.24□□□□□ -1.89
AP001960.1-201ENST00000506494 hADV38S2A0JD32 116 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms