RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 FAM90A1Q86YD7 464 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 TGIF2LYQ8IUE0 185 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 OR1P1Q8NH06 330 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 YPEL2Q96QA6 119 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 MGST2Q99735 147 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 SLC25A15Q9Y619 301 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 PXMP4Q9Y6I8 212 aa6.3□□□□□ -1.4
PPARGC1A-204ENST00000506055 AHRRA9YTQ3 701 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 GFRA3O60609 400 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 CGAP01215 116 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 AMBPP02760 352 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 FTH1P19P0C7X4 201 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 OPRK1P41145 380 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 FAM78BQ5VT40 261 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 LURAP1LQ8IV03 231 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 ZNF114Q8NC26 417 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 DEFB108BQ8NET1 73 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 PPP1R35Q8TAP8 253 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 HINT2Q9BX68 163 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 MGAQ8IWI9 3026 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 SVILO95425 2214 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 MPDU1O75352 247 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 NUBP1P53384 320 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 KLF3P57682 345 aaPredicted RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 PAX5Q02548 391 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 KCNIP4Q6PIL6 250 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 DUX4L9Q6RFH8 374 aaPredicted RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 IGFL2Q6UWQ7 119 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 SEM1Q6ZVN7 128 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 ITLN1Q8WWA0 313 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 KCNIP2Q9NS61 270 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 CALYQ9NYX4 217 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 DCHS1Q96JQ0 3298 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 KALRNO60229 2985 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 A0A0U1RQK1 487 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 ZNF320A2RRD8 509 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 MYOD1P15172 320 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 SRP14P37108 136 aaKnown RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 CT45A1Q5HYN5 189 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 RPRMLQ8N4K4 120 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 CT45A3Q8NHU0 189 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 GGTLC1Q9BX51 225 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 NPVFQ9HCQ7 196 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 ASCL3Q9NQ33 180 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 TCF19Q9Y242 345 aa6.29□□□□□ -1.4
PPARGC1A-204ENST00000506055 INTS1Q8N201 2190 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 PTPRBP23467 1997 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 SAA2-SAA4A0A096LPE2 208 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 A0A1B0GWJ7 208 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 ZNF705GA8MUZ8 300 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 TSTD3H0UI37 97 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 F2RL2O00254 374 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 GGCTO75223 188 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 NDUFS6O75380 124 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 CXorf1O96002 111 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 GZMBP10144 247 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 GPX4P36969 197 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 GNG10P50151 68 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 AARDQ4LEZ3 155 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 OR4A47Q6IF82 309 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 ZNF474Q6S9Z5 364 aaPredicted RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 UNQ6494/PRO21346Q6UXR6 183 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 C1orf174Q8IYL3 243 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 LYG1Q8N1E2 194 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 OR52E5Q8NH55 327 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 OR4S2Q8NH73 311 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 RAB1CQ92928 201 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 TRBV20OR9-2A0A075B6H5 130 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 SCO2A0A1W2PP80 73 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 F6UZH7 168 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 FOXH1O75593 365 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 LHBP01229 141 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 IL3RAP26951 378 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 HCFC1P51610 2035 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 PKIAP61925 76 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 C17orf58Q2M2W7 97 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 TEPPQ6URK8 271 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 CISD2Q8N5K1 135 aaKnown RBP6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 SGMS2Q8NHU3 365 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 DDB2Q92466 427 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 SFRP2Q96HF1 295 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 C14orf144Q96I85 54 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
PPARGC1A-204ENST00000506055 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms