RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ZNF66	Q6ZN08	573 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	TCTEX1D1	Q8N7M0	179 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	ZNF439	Q8NDP4	499 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	IL22RA2	Q969J5	263 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	ST6GALNAC6	Q969X2	333 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	C2orf50	Q96LR7	162 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	GPHA2	Q96T91	129 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	CITED2	Q99967	270 aa	Predicted RBP	11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	AGMAT	Q9BSE5	352 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	SDHAF2	Q9NX18	166 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	TMED3	Q9Y3Q3	217 aa		11.7	□□□□□ -0.54
CNBP-208	ENST00000504813	SH2D7	A6NKC9	451 aa	Predicted RBP	11.69	□□□□□ -0.54
CNBP-208	ENST00000504813		M0QZK8	103 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	CDS2	O95674	445 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	IAH1	Q2TAA2	248 aa	Predicted RBP	11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	NDUFA11	Q86Y39	141 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	SELENOH	Q8IZQ5	122 aa	Known RBP	11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	TCTEX1D2	Q8WW35	142 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	RBPMS	Q93062	196 aa	Known RBP	11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	GSKIP	Q9P0R6	139 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	GAB2	Q9UQC2	676 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	MOB4	Q9Y3A3	225 aa		11.69	□□□□□ -0.54
CNBP-208	ENST00000504813	IGHV1-3	A0A0C4DH29	117 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	RAB29	O14966	203 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	SLC31A2	O15432	143 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	OPN1MW	P04001	364 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	GAPDH	P04406	335 aa	Known RBP	11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	OPN1MW2	P0DN77	364 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	OPN1MW3	P0DN78	364 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	ZNF134	P52741	427 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	EBI3	Q14213	229 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	NSUN5P1	Q3KNT7	163 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	CT45A1	Q5HYN5	189 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	SLC25A48	Q6ZT89	311 aa	Known RBP	11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	LYZL2	Q7Z4W2	148 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	SLC35G3	Q8N808	338 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	OR5AU1	Q8NGC0	362 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	CT45A3	Q8NHU0	189 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	RNASE11	Q8TAA1	199 aa	Known RBP	11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	THAP6	Q8TBB0	222 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	SPIN2A	Q99865	258 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	SPIN2B	Q9BPZ2	258 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	IFI27L2	Q9H2X8	130 aa		11.68	□□□□□ -0.54
CNBP-208	ENST00000504813	ATG12	O94817	140 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	IGKV1D-33	P01593	117 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	IGKV1-33	P01594	117 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	RPA2	P15927	270 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	TMEM11	P17152	192 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	PSMB6	P28072	239 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	REG1B	P48304	166 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	ZNF137P	P52743	207 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	HES1	Q14469	280 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	LRRC37A5P	Q49AS3	106 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	THOC7	Q6I9Y2	204 aa	Known RBP	11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	C5orf56	Q8N8D9	126 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	LHFPL5	Q8TAF8	219 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	PPP1R1C	Q8WVI7	109 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	WDR89	Q96FK6	387 aa	Predicted RBP	11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	OR10C1	Q96KK4	312 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	S1PR3	Q99500	378 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	ZFP57	Q9NU63	452 aa		11.67	□□□□□ -0.54
CNBP-208	ENST00000504813	FXYD6-FXYD2	A0A087WZ82	144 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813		M0R1X1	148 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	PET100	P0DJ07	73 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	VDAC1	P21796	283 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813		Q5BKY6	102 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	TCTEX1D4	Q5JR98	221 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	MOB3B	Q86TA1	216 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	CD300LF	Q8TDQ1	290 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	PRELID3B	Q9Y3B1	194 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	HSPB11	Q9Y547	144 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	NOTCH1	P46531	2555 aa		11.66	□□□□□ -0.54
CNBP-208	ENST00000504813	IGHV3-72	A0A0B4J1Y9	119 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	FGF16	O43320	207 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	C4BPB	P20851	252 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	IL3RA	P26951	378 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	KIR2DS2	P43631	304 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	LPAR6	P43657	344 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	HNF4G	Q14541	408 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	SMCO1	Q147U7	214 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	C9orf152	Q5JTZ5	239 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	C10orf99	Q6UWK7	81 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	SPAG16	Q8N0X2	631 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813		Q8N6K4	173 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	OR11H4	Q8NGC9	324 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	RRNAD1	Q96FB5	475 aa	Known RBP	11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	ADTRP	Q96IZ2	230 aa		11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	EAF1	Q96JC9	268 aa	Predicted RBP	11.65	□□□□□ -0.54
CNBP-208	ENST00000504813	SAA2-SAA4	A0A096LPE2	208 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	HMSD	A8MTL9	139 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	MPTX1	A8MV57	137 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813		G3V3Q6	166 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	MPC2	O95563	127 aa		11.65	□□□□□ -0.55
CNBP-208	ENST00000504813	RLN2	P04090	185 aa		11.65	□□□□□ -0.55

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