RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 VBP1P61758 197 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 NHLH2Q02577 135 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 MRGPRG-AS1Q2M3A8 158 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 PAN3Q58A45 887 aaKnown RBP7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 Q6P435 159 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 BTNL8Q6UX41 500 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 RASSF6Q6ZTQ3 369 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 TPRA1Q86W33 373 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 TCTE3Q8IZS6 198 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 TCEANCQ8N8B7 351 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 OR5H6Q8NGV6 325 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 LRRC20Q8TCA0 184 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 CCDC90BQ9GZT6 254 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 DUSP21Q9H596 190 aa7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 TECRQ9NZ01 308 aaKnown RBP7.09□□□□□ -1.27
SMARCAL1-213ENST00000496037 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 A0A1B0GTI1 187 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 LOC100130705A0A1B0GUX0 176 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 G3V2T6 193 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 H3BUA1 57 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 CRTAPO75718 401 aaPredicted RBP7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 NDUFA3O95167 84 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 PSMB9P28065 219 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 TALDO1P37837 337 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 SRSF3P84103 164 aaKnown RBP7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 ERASQ7Z444 233 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 NR2C2APQ86WQ0 139 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 PARP16Q8N5Y8 322 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 NPBQ8NG41 125 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 RAB40CQ96S21 281 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 TTTY10Q9BZA0 68 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF556Q9HAH1 456 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 SAMD4AQ9UPU9 718 aaKnown RBP7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 FAT1Q14517 4588 aa7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 SRRM2Q9UQ35 2752 aaKnown RBP7.08□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRGV11A0A075B6L2 103 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGHV3-43A0A0B4J1X8 118 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 LINC00862A6NCI5 91 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 SLC31A2O15432 143 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 SYT7O43581 403 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF780AO75290 641 aaPredicted RBP7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 SOX14O95416 240 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRBV12-3P01733 135 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 RBMY1CP0DJD4 496 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGHV3-43DP0DP04 118 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 EGR2P11161 476 aaPredicted RBP7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 CD36P16671 472 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 HLA-DMAP28067 261 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 KCNJ3P48549 501 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 HCCSP53701 268 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 LINC00310P59036 64 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 NCS1P62166 190 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 FGL1Q08830 312 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 GGNBP1Q5YKI7 109 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 Q6ZSR3 168 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR9Q2Q8NGE9 314 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 LHFPL5Q8TAF8 219 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 UBALD1Q8TB05 177 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 ARL11Q969Q4 196 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 TMEM80Q96HE8 168 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 RITA1Q96K30 269 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 UQCC2Q9BRT2 126 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 GABARAPL1Q9H0R8 117 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 FBXL15Q9H469 300 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 DNAJC4Q9NNZ3 241 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 R4GMQ9 66 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 V9GYQ6 96 aa7.07□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGLV2-18A0A075B6J9 118 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 FOLR2P14207 255 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 NCK1P16333 377 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 GZMHP20718 246 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 CCL1P22362 96 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 ODF4Q2M2E3 257 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 TIMM50Q3ZCQ8 353 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 GLYATQ6IB77 296 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 LAIR2Q6ISS4 152 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF343Q6P1L6 599 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 TMEM179BQ7Z7N9 219 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 TMEM61Q8N0U2 210 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 ASB17Q8WXJ9 295 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 RFT1Q96AA3 541 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 RARRES2Q99969 163 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 ALG8Q9BVK2 526 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 C6orf62Q9GZU0 229 aaPredicted RBP7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 MAGT1Q9H0U3 335 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms