RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GSTT2BP0CG30 244 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 FCGR2BP31994 310 aaPredicted RBP9.87□□□□□ -0.83
COL1A1-209ENST00000495677 MED22Q15528 200 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 IGSF11Q5DX21 431 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 LAMTOR1Q6IAA8 161 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 OR6M1Q8NGM8 313 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 VSTM2AQ8TAG5 236 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 ARHGAP5-AS1Q96IT6 56 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 ZNF436Q9C0F3 470 aaPredicted RBP9.87□□□□□ -0.83
COL1A1-209ENST00000495677 KCNK15Q9H427 330 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 IGLV11-55A0A075B6I3 123 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 DPPA5A6NC42 116 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 ERICH4A6NGS2 130 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 BET1O15155 118 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 RPL27AP46776 148 aaKnown RBP9.86□□□□□ -0.83
COL1A1-209ENST00000495677 WNT4P56705 351 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 ST3GAL4Q11206 333 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 PLAC9Q5JTB6 97 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 ZNF555Q8NEP9 628 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 FBXL17Q9UF56 701 aa9.86□□□□□ -0.83
COL1A1-209ENST00000495677 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
COL1A1-209ENST00000495677 A0A1B0GW64 132 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 MPTX1A8MV57 137 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 ANKRD65E5RJM6 399 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
COL1A1-209ENST00000495677 MFAP2P55001 183 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 CMC4P56277 68 aaPredicted RBP9.85□□□□□ -0.83
COL1A1-209ENST00000495677 ARFRP1Q13795 201 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 INSL4Q14641 139 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
COL1A1-209ENST00000495677 PUSL1Q8N0Z8 303 aaKnown RBP9.85□□□□□ -0.83
COL1A1-209ENST00000495677 OR56B1Q8NGI3 324 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 TMEM167AQ8TBQ9 72 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 OR2A7Q96R45 310 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 KRTAP4-5Q9BYR2 181 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 C6orf62Q9GZU0 229 aaPredicted RBP9.85□□□□□ -0.83
COL1A1-209ENST00000495677 HRH4Q9H3N8 390 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 S4R3C0 116 aa9.85□□□□□ -0.83
COL1A1-209ENST00000495677 PKD1P98161 4303 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 IGLL5B9A064 214 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 SLC17A2O00624 439 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 KBTBD11O94819 623 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 S1PR2O95136 353 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 RANBP1P43487 201 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 P2RY14Q15391 338 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 PLET1Q6UQ28 207 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 Q6ZS49 121 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 C19orf35Q6ZS72 473 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 H1FOOQ8IZA3 346 aaPredicted RBP9.84□□□□□ -0.83
COL1A1-209ENST00000495677 NANOGP1Q8N7R0 232 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 OR11H2Q8NH07 326 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 ZNF502Q8TBZ5 544 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 TMEM190Q8WZ59 177 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 DCUN1D5Q9BTE7 237 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 KCNK7Q9Y2U2 307 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 PRELID3BQ9Y3B1 194 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 DYNC1H1Q14204 4646 aaKnown RBP9.84□□□□□ -0.83
COL1A1-209ENST00000495677 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
COL1A1-209ENST00000495677 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 PRSS29PA6NIE9 313 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 K7EMT4 169 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 FCGR3BO75015 233 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 FCGR3AP08637 254 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 AREGP15514 252 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 PTBP1P26599 531 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL1A1-209ENST00000495677 ZNF645Q8N7E2 425 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 CD300LFQ8TDQ1 290 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 ATP6V0BQ99437 205 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 DAZ1Q9NQZ3 744 aaKnown RBP9.83□□□□□ -0.84
COL1A1-209ENST00000495677 THYN1Q9P016 225 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 MRPS7Q9Y2R9 242 aaKnown RBP9.83□□□□□ -0.84
COL1A1-209ENST00000495677 AGRNO00468 2067 aa9.83□□□□□ -0.84
COL1A1-209ENST00000495677 MYL12BO14950 172 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 SLC22A5O76082 557 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 UCHL1P09936 223 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 DEFA4P12838 97 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 GPR183P32249 361 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 MRPS15P82914 257 aaKnown RBP9.82□□□□□ -0.84
COL1A1-209ENST00000495677 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 C10orf67Q8IYJ2 551 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 OR5B3Q8NH48 314 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 GINS4Q9BRT9 223 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 SMPD3Q9NY59 655 aaPredicted RBP9.82□□□□□ -0.84
COL1A1-209ENST00000495677 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
COL1A1-209ENST00000495677 CGB1A6NKQ9 187 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 RTL8CO15255 209 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 TGOLN2O43493 480 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 XRCC3O43542 346 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 PSMD7P51665 324 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 RPL30P62888 115 aaKnown RBP9.81□□□□□ -0.84
COL1A1-209ENST00000495677 C2orf76Q3KRA6 126 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 KCTD9Q7L273 389 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 NR2C2APQ86WQ0 139 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 VKORC1L1Q8N0U8 176 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 GFI1Q99684 422 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
COL1A1-209ENST00000495677 PLGRKTQ9HBL7 147 aa9.81□□□□□ -0.84
COL1A1-209ENST00000495677 ETV7Q9Y603 341 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms