RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 GRPRP30550 384 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 LGALS7P47929 136 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 STC1P52823 247 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 BAXQ07812 192 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 BNIP2Q12982 314 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 ATP6AP1LQ52LC2 224 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 PDZD11Q5EBL8 140 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.16□□□□□ -2.06
SMC4-224ENST00000494612 DGAT2L6Q6ZPD8 337 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 Q6ZS92 163 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 DNAAF3Q8N9W5 541 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 LINC00301Q8NCQ3 95 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 ZNF555Q8NEP9 628 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 OR6K3Q8NGY3 331 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 CMTM5Q96DZ9 223 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 ANAPC13Q9BS18 74 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 NSRP1Q9H0G5 558 aaKnown RBP2.16□□□□□ -2.06
SMC4-224ENST00000494612 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 RHOFQ9HBH0 211 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 COMMD9Q9P000 198 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 TAC3Q9UHF0 121 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 ICOSQ9Y6W8 199 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 R4GN34 69 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 HIVEP1P15822 2718 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 SVILO95425 2214 aa2.15□□□□□ -2.06
SMC4-224ENST00000494612 POLQO75417 2590 aa2.15□□□□□ -2.06
SMC4-224ENST00000494612 DCHS2Q6V1P9 2916 aa2.15□□□□□ -2.06
SMC4-224ENST00000494612 IGKV1OR2-108A0A075B7D4 117 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 TRAV8-2A0A0B4J237 113 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 OR5K4A6NMS3 321 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 OR2AT4A6NND4 320 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 IGLL5B9A064 214 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 C4orf51C9J302 202 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 IGHMP01871 453 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 UQCRHP07919 91 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 SNRPAP09012 282 aaKnown RBP2.15□□□□□ -2.07
SMC4-224ENST00000494612 INAFM2P0DMQ5 153 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 SPNP16150 400 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 CA5AP35218 305 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 RPL14P50914 215 aaKnown RBP2.15□□□□□ -2.07
SMC4-224ENST00000494612 DLX6P56179 175 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 IHHQ14623 411 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 TAF9Q16594 264 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 ZNF404Q494X3 552 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 PYCR3Q53H96 274 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 TTMPQ5BVD1 217 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 CLEC12AQ5QGZ9 265 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 FAM45BPQ6NSW5 357 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 XKRXQ6PP77 449 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 GALNT10Q86SR1 603 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 ZNF664Q8N3J9 261 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 GATD1Q8NB37 220 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 ACBD4Q8NC06 268 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 OR5L1Q8NGL2 311 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 TWIST2Q8WVJ9 160 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 CCL17Q92583 94 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 HBEGFQ99075 208 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 LINC01587Q99440 93 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 GPR22Q99680 433 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 SUCNR1Q9BXA5 334 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 PLEKHJ1Q9NW61 149 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 TAS2R1Q9NYW7 299 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 NAGKQ9UJ70 344 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 BTRCQ9Y297 605 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 COQ4Q9Y3A0 265 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 DOCK4Q8N1I0 1966 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 HIVEP3Q5T1R4 2406 aa2.15□□□□□ -2.07
SMC4-224ENST00000494612 PCNX1Q96RV3 2341 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 SETD2Q9BYW2 2564 aaPredicted RBP2.14□□□□□ -2.07
SMC4-224ENST00000494612 TACC2O95359 2948 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 A0A1B0GXF2 115 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 TLCD2A6NGC4 264 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 FTCDNL1E5RQL4 147 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 C19orf84I3L1E1 186 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 SOD3P08294 240 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 SLC2A1P11166 492 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 PSKH1P11801 424 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 UGT2B7P16662 529 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 AKR1C4P17516 323 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 PRTN3P24158 256 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 SDC4P31431 198 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 RCVRNP35243 200 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 CA7P43166 264 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 MAGEA2P43356 314 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 CAPZBP47756 277 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 CLDN12P56749 244 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 AP1S1P61966 158 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 Q499Y3 187 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 ZCWPW2Q504Y3 356 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 NXNL2Q5VZ03 156 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 LAMTOR1Q6IAA8 161 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 DRAM2Q6UX65 266 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 PAGE2Q7Z2X7 111 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 SLC13A5Q86YT5 568 aaPredicted RBP2.14□□□□□ -2.07
SMC4-224ENST00000494612 TMEM251Q8N6I4 163 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 ITFG2Q969R8 447 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 IGF2BP2-AS1Q96M15 143 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 RBP7Q96R05 134 aa2.14□□□□□ -2.07
SMC4-224ENST00000494612 PAIP2Q9BPZ3 127 aaKnown RBP2.14□□□□□ -2.07
SMC4-224ENST00000494612 UCK1Q9HA47 277 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms