RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CYB5BO43169 146 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL6A1-205ENST00000492851 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 CRYGCP07315 174 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 FCGR2CP31995 323 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 ZNF45Q02386 682 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 CATR1Q13166 79 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 EIF4EBP1Q13541 118 aaPredicted RBP9.47□□□□□ -0.89
COL6A1-205ENST00000492851 OR2B11Q5JQS5 317 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 ZNF773Q6PK81 442 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 HOGA1Q86XE5 327 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 PUSL1Q8N0Z8 303 aaKnown RBP9.47□□□□□ -0.89
COL6A1-205ENST00000492851 CD300LFQ8TDQ1 290 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 TAS2R8Q9NYW2 309 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 FBXL7Q9UJT9 491 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 IGKV1D-13A0A0B4J2D9 117 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 SSX5O60225 188 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 OR2J3O76001 311 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 TPPPO94811 219 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 PRH1P02810 166 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 FGF2P09038 288 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 ZNF735P0CB33 412 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 DEFA4P12838 97 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 PSMB6P28072 239 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 TAS2R31P59538 309 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 RPL8P62917 257 aaKnown RBP9.46□□□□□ -0.9
COL6A1-205ENST00000492851 MXD1Q05195 221 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 HAGHQ16775 308 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 KLK9Q2XQG4 91 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 TIMM50Q3ZCQ8 353 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 IDNKQ5T6J7 187 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 GIMAP1Q8WWP7 306 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 EEF1AKMT3Q96AZ1 226 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.9
COL6A1-205ENST00000492851 FYTTD1Q96QD9 318 aaKnown RBP9.46□□□□□ -0.9
COL6A1-205ENST00000492851 THAP7Q9BT49 309 aaPredicted RBP9.46□□□□□ -0.9
COL6A1-205ENST00000492851 BET1LQ9NYM9 111 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 THYN1Q9P016 225 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 KLK9Q9UKQ9 250 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.9
COL6A1-205ENST00000492851 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 LOC100506127A0A0U1RQW1 187 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 HMX3A6NHT5 357 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 RBMXL2O75526 392 aaKnown RBP9.45□□□□□ -0.9
COL6A1-205ENST00000492851 HPRT1P00492 218 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 PPYP01298 95 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 IL6RP08887 468 aaPredicted RBP9.45□□□□□ -0.9
COL6A1-205ENST00000492851 HLA-GP17693 338 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 DEFA5Q01523 94 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 OR4A47Q6IF82 309 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 VKORC1L1Q8N0U8 176 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
COL6A1-205ENST00000492851 EDA2RQ9HAV5 297 aa9.45□□□□□ -0.9
COL6A1-205ENST00000492851 FOLR2P14207 255 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 NQO2P16083 231 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 CTRB1P17538 263 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 BRWD1-AS2P59051 145 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 CD81P60033 236 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
COL6A1-205ENST00000492851 C10orf55Q5SWW7 151 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 THOC7Q6I9Y2 204 aaKnown RBP9.44□□□□□ -0.9
COL6A1-205ENST00000492851 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
COL6A1-205ENST00000492851 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 NEURL2Q9BR09 285 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 COMMD5Q9GZQ3 224 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 SLC5A7Q9GZV3 580 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 AUNIPQ9H7T9 357 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 CCL28Q9NRJ3 127 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 ADAM30Q9UKF2 790 aa9.44□□□□□ -0.9
COL6A1-205ENST00000492851 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 XRCC3O43542 346 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 OR2C1O95371 312 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 ARL3P36405 182 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 ANKRD55Q3KP44 614 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 KCTD21Q4G0X4 260 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 SSX9Q7RTT3 188 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 SLC16A13Q7RTY0 426 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 PLEKHA2Q9HB19 425 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 ZC4H2Q9NQZ6 224 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 DMRT1Q9Y5R6 373 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 CEPT1Q9Y6K0 416 aa9.43□□□□□ -0.9
COL6A1-205ENST00000492851 ZNF320A2RRD8 509 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 IZUMO1RA6ND01 250 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms