RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 FAM215AQ9Y5M1 114 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 IGLV3-9A0A075B6K5 115 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 UPK2O00526 184 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 WT1P19544 449 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 VKORC1L1Q8N0U8 176 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 A0A087WWC5 75 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 DNASE2O00115 360 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 RBP4P02753 201 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 SRP14P37108 136 aaKnown RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 TMEM14EPQ6UXP3 125 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR4F17Q8NGA8 305 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR2T10Q8NGZ9 312 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 BSCL2Q96G97 398 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 FGF23Q9GZV9 251 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 METRNQ9UJH8 293 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 RAXQ9Y2V3 346 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 TSTD3H0UI37 97 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 CA2P00918 260 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR10J4P0C629 311 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR10J1P30954 320 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 SNRPEP62304 92 aaKnown RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 HLA-DRB5Q30154 266 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 MIC13Q5XKP0 118 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 ST6GALNAC3Q8NDV1 305 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR4X1Q8NH49 305 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 CACNG8Q8WXS5 425 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 GAFA1Q96PS6 74 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 SAMD10Q9BYL1 202 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF430Q9H8G1 570 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 GAR1Q9NY12 217 aaKnown RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 TMEM178BH3BS89 294 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 RPL30P62888 115 aaKnown RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 OR10G8Q8NGN5 311 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 ZCCHC14Q8WYQ9 949 aaKnown RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 WFIKKN1Q96NZ8 548 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF257Q9Y2Q1 563 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 VENTXO95231 258 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 HTR1DP28221 377 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 RPEL1Q2QD12 228 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 HEPN1Q6WQI6 88 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF788Q6ZQV5 615 aa6.1□□□□□ -1.43
NPHP3-208ENST00000490993 FOXA2Q9Y261 457 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-208ENST00000490993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 TFF1P04155 84 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 MAS1LP35410 378 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF585BQ52M93 769 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 NCMAPQ5T1S8 102 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 FAM162BQ5T6X4 162 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 FAM71F2Q6NXP2 309 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 SLC16A13Q7RTY0 426 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 BAGE2Q86Y30 109 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 BARX1Q9HBU1 254 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 BET1LQ9NYM9 111 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 METTL1Q9UBP6 276 aaKnown RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 LOC105371242A0A075B767 164 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 CD55P08174 381 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 HNF1AP20823 631 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 GPX4P36969 197 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 MMDQ15546 238 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 RNASEH2CQ8TDP1 164 aaKnown RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 HELTA6NFD8 242 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 SEC14L6B5MCN3 397 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 SLC25A5P05141 298 aaKnown RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 OR9G9P0C7N8 305 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 CT45A10P0DMU9 189 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 Q56UQ5 140 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 WDR73Q6P4I2 378 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 RASL11BQ9BPW5 248 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 PCGF1Q9BSM1 259 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 MRPL20Q9BYC9 149 aaKnown RBP6.09□□□□□ -1.43
NPHP3-208ENST00000490993 CBLN4Q9NTU7 201 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF835Q9Y2P0 537 aa6.09□□□□□ -1.43
NPHP3-208ENST00000490993 DPRXA6NFQ7 191 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 CA7P43166 264 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 ADIPOQQ15848 244 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 CRIP3Q6Q6R5 217 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 STPG3Q8N7X2 389 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM18Q96B42 140 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 C12orf57Q99622 126 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 IFI27L2Q9H2X8 130 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 DKK4Q9UBT3 224 aa6.09□□□□□ -1.44
NPHP3-208ENST00000490993 SLC25A17O43808 307 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 IL6RP08887 468 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-208ENST00000490993 ORM2P19652 201 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 PRCDQ00LT1 54 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 TFF3Q07654 80 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 FABP9Q0Z7S8 132 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 ICAM4Q14773 271 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 GUSBP1Q15486 140 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 GATAD1Q8WUU5 269 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM133Q9H2Q1 129 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 WDR83OSQ9Y284 106 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms