RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ENDOGQ14249 297 aaKnown RBP2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 IL11RAQ14626 422 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 ADIRFQ15847 76 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 RSPO1Q2MKA7 263 aaPredicted RBP2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 VWC2Q2TAL6 325 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 AARDQ4LEZ3 155 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 MORN2Q502X0 79 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 KCNIP4Q6PIL6 250 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TOMM20LQ6UXN7 152 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 LINC01551Q86U37 167 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TBC1D26Q86UD7 250 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 COMMD2Q86X83 199 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 UEVLDQ8IX04 471 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 C1orf174Q8IYL3 243 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 OR2D3Q8NGH3 330 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 OR5D18Q8NGL1 313 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 MRPL30Q8TCC3 161 aaKnown RBP2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 NEK7Q8TDX7 302 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 OR5P3Q8WZ94 311 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TMEM54Q969K7 222 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TOMM40LQ969M1 308 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 NABP1Q96AH0 204 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC35E1Q96K37 410 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TECTBQ96PL2 329 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 RNF2Q99496 336 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 PCGF1Q9BSM1 259 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 SCNM1Q9BWG6 230 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 WDR61Q9GZS3 305 aaKnown RBP2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 RIMS4Q9H426 269 aaPredicted RBP2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 DNAJC4Q9NNZ3 241 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC35D1Q9NTN3 355 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 MED29Q9NX70 200 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF391Q9UJN7 358 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 TP53TG3Q9ULZ0 132 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 POLR1DQ9Y2S0 133 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 NCOR2Q9Y618 2525 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 MED12LQ86YW9 2145 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 SHANK1Q9Y566 2161 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF407Q9C0G0 2248 aa2.87□□□□□ -1.95
CRNKL1-203ENST00000490258 ACACBO00763 2458 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 ESPL1Q14674 2120 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 DOCK7Q96N67 2140 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 FREM1Q5H8C1 2179 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 LOC105371242A0A075B767 164 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TRBV9A0A0B4J1U6 114 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGHV3-15A0A0B4J1V0 119 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGKV1D-13A0A0B4J2D9 117 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGHV2-70DA0A0C4DH43 119 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 C20orf202A1L168 122 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 LRP5LA4QPB2 252 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC22A20A6NK97 555 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CEBPZOSA8MTT3 80 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 M0R135 149 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC33A1O00400 549 aaPredicted RBP2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SYNGR2O43760 224 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CHST1O43916 411 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 EFNA2O43921 213 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 NUPR1O60356 82 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF737O75373 536 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 NDUFB8O95169 186 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGKV1D-33P01593 117 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGKV1-33P01594 117 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 GYPAP02724 150 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 P0C879 139 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 IGKV1-13P0DP09 117 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CCL3P10147 92 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TMEM11P17152 192 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 MSR1P21757 451 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 OMGP23515 440 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 NPPCP23582 126 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 F2RP25116 425 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CD1BP29016 333 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CHRNB4P30926 498 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 MC5RP33032 325 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 PSMB3P49720 205 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 GNG10P50151 68 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 LHX2P50458 406 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 CEBPGP53567 150 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 FXYD4P59646 89 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 ERVS71-1P61550 626 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 HBG1P69891 147 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 HBG2P69892 147 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 ARL16Q0P5N6 197 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 MYBPHQ13203 477 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 MFAP5Q13361 173 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TRA2AQ13595 282 aaKnown RBP eCLIP2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 OR5I1Q13606 314 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 PLPPR5Q32ZL2 321 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 LEMD1Q68G75 181 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC25A24Q6NUK1 477 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 LCN15Q6UWW0 184 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TMEM14EPQ6UXP3 125 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 P4HA3Q7Z4N8 544 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SAXO1Q8IYX7 474 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TMEM256Q8N2U0 113 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 RPP25LQ8N5L8 163 aaKnown RBP2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 C11orf42Q8N5U0 333 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 TMEM217Q8N7C4 229 aa2.86□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC24A4Q8NFF2 622 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms