RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 M0R1X1 148 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 AGPAT2O15120 278 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 HRASP01112 189 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 ARG1P05089 322 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 THBDP07204 575 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 METTL15P1P0C7V9 234 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 DAOP14920 347 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 PPT1P50897 306 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 BSPH1Q075Z2 132 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM267Q0VDI3 215 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM249Q2WGJ8 235 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SOHLH1Q5JUK2 328 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 NCMAPQ5T1S8 102 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 FAM122CQ6P4D5 195 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SPSB3Q6PJ21 355 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SLC25A48Q6ZT89 311 aaKnown RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 Q8N3U1 123 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF439Q8NDP4 499 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 RFESDQ8TAC1 157 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM231Q9H6L2 316 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 SAP30LQ9HAJ7 183 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 FKBP11Q9NYL4 201 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 RPUSD1Q9UJJ7 312 aaKnown RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 FOXA2Q9Y261 457 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF257Q9Y2Q1 563 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 A0A087WWC5 75 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 FAM74A7A6NL05 159 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PMS2P5A8MQ11 134 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 B9A039 149 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 H3BP45 60 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PROP1O75360 226 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 IAPPP10997 89 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 FOLR2P14207 255 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 COX6B1P14854 86 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 MDKP21741 143 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-207ENST00000489357 FHITP49789 147 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 OR2B8PP59922 312 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 DLK1P80370 383 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-207ENST00000489357 RTL8BQ17RB0 113 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 RNF212Q495C1 297 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 FAM74A3Q4VXF1 159 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PRAMEF5Q5TYX0 476 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 HEPN1Q6WQI6 88 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 RBMS3Q6XE24 437 aaKnown RBP6.95□□□□□ -1.3
VTI1A-207ENST00000489357 HAPLN4Q86UW8 402 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 TPRX1Q8N7U7 411 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF709Q8N972 641 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 OR4A16Q8NH70 328 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 CLDND2Q8NHS1 167 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 UBALD1Q8TB05 177 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF596Q8TC21 504 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 SFT2D1Q8WV19 159 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 OR4C12Q96R67 309 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 CISD1Q9NZ45 108 aaKnown RBP6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PRNDQ9UKY0 176 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 PRELID1Q9Y255 219 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 POLQO75417 2590 aa6.95□□□□□ -1.3
VTI1A-207ENST00000489357 DSCAMO60469 2012 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 PPIAL4EA0A075B759 164 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 IGHV3OR15-7A0A075B7D8 119 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 A0A087X0M5 115 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TRBV23-1A0A0A0MS06 115 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 IGHV3-43A0A0B4J1X8 118 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 A0A1B0GX30 115 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 C15orf61A6NNL5 157 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 CEBPZOSA8MTT3 80 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 C9JQL5 133 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 PPIAL4DF5H284 164 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TNFRSF13BO14836 293 aaPredicted RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 FCGR3BO75015 233 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 RBMXL2O75526 392 aaKnown RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 NXPH3O95157 252 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 PPIAL4FP0DN26 164 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 IGHV3-43DP0DP04 118 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 APOBEC3AP31941 199 aaPredicted RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 NPBWR1P48145 328 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 RAB11AP62491 216 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 MRPS11P82912 194 aaKnown RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 RUNX1Q01196 453 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 IZUMO4Q1ZYL8 232 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 HFEQ30201 348 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 LRRC10Q5BKY1 277 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 CT45A1Q5HYN5 189 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 BTNL3Q6UXE8 466 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 SLC35E3Q7Z769 313 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 WFDC3Q8IUB2 231 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 LINC00311Q8N616 119 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 CT45A3Q8NHU0 189 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 OSR1Q8TAX0 266 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms