RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 A0A0G2JMP0 313 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 A0A0X1KG70 313 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 NME4O00746 187 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CDC42EP2O14613 210 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 FFAR1O14842 300 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 BET1O15155 118 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MGRN1O60291 552 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 SLC16A7O60669 478 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 RP2O75695 350 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CNIH1O95406 144 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IGHV1-46P01743 117 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IGHV3-23P01764 117 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IGHMP01871 453 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CD14P08571 375 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CST2P09228 141 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MMP7P09237 267 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ACSM4P0C7M7 580 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IGKV1-13P0DP09 117 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CTLA4P16410 223 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 RBMXP38159 391 aaKnown RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 GLP1RP43220 463 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 VDAC2P45880 294 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 RANP62826 216 aaKnown RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 SELENOWP63302 87 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 PRKCDQ05655 676 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ECH1Q13011 328 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 Q1RN00 199 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ZBED5Q49AG3 693 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ACSM3Q53FZ2 586 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 GCSAMLQ5JQS6 135 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 C1orf100Q5SVJ3 147 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 FAM27BQ5VT28 67 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CNIH2Q6PI25 160 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 TBPL2Q6SJ96 375 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 SMARCD3Q6STE5 483 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF620Q6ZNG0 422 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MBOAT2Q6ZWT7 520 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 AHSA2Q719I0 299 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MOB1BQ7L9L4 216 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 HSD17B13Q7Z5P4 300 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF101Q8IZC7 436 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 TEX29Q8N6K0 151 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 INO80EQ8NBZ0 244 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR4M2Q8NGB6 313 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR10AD1Q8NGE0 317 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR2D3Q8NGH3 330 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR52L1Q8NGH7 329 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR9G1Q8NH87 305 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 RNASE11Q8TAA1 199 aaKnown RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 LHFPL5Q8TAF8 219 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 LGALS14Q8TCE9 139 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MRAPQ8TCY5 172 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 BAALCQ8WXS3 180 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 PTH2Q96A98 100 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ISOC2Q96AB3 205 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 CMBLQ96DG6 245 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 FAM210BQ96KR6 192 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ERMAPQ96PL5 475 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 OR5B12Q96R08 314 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 C12orf57Q99622 126 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 KIR2DL4Q99706 377 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 NIPSNAP1Q9BPW8 284 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 MICU1Q9BPX6 476 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 SYT4Q9H2B2 425 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF430Q9H8G1 570 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF702PQ9H963 129 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 EFCAB1Q9HAE3 211 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 NMNAT1Q9HAN9 279 aaPredicted RBP2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ING4Q9UNL4 249 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IER3IP1Q9Y5U9 82 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 ENPP4Q9Y6X5 453 aa2.45□□□□□ -2.02
GPNMB-212ENST00000487890 IGLV3-9A0A075B6K5 115 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 A0A087WUU8 490 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.44□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF816-ZNF321PA0A0X1KG74 233 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 A0A1B0GW55 424 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 OR6C6A6NF89 314 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 TVP23AA6NH52 213 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 RFPL4AA6NLU0 287 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 DISC1C4P0D8 188 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 C12orf77C9JDV5 145 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 F5H5K5 113 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 RFPL4AL1F8VTS6 287 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 H3BSA7 217 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 CLDN34H7C241 214 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 RER1O15258 196 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 ENSAO43768 121 aaKnown RBP2.44□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF780AO75290 641 aaPredicted RBP2.44□□□□□ -2.02
GPNMB-212ENST00000487890 FOXH1O75593 365 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 EIF3GO75821 320 aaKnown RBP eCLIP2.44□□□□□ -2.02
GPNMB-212ENST00000487890 NDUFB2O95178 105 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 GADD45GO95257 159 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 IGF2P01344 180 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 CD5P06127 495 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 GIG44P09565 113 aaPredicted RBP2.44□□□□□ -2.02
GPNMB-212ENST00000487890 NBEAP1P0C6P0 100 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 LINC00614P0C842 121 aa2.44□□□□□ -2.02
GPNMB-212ENST00000487890 OCM2P0CE71 109 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms