RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 C11orf52Q96A22 123 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 COQ2Q96H96 371 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CEP19Q96LK0 163 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ERMAPQ96PL5 475 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 SORT1Q99523 831 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 OSBPL10Q9BXB5 764 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ANKRD60Q9BZ19 345 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 C20orf27Q9GZN8 174 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TMEM231Q9H6L2 316 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 LINC00574Q9H8X3 128 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ROPN1Q9HAT0 212 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 DCAF13Q9NV06 445 aaKnown RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 IDI2-AS1Q9NZ38 188 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 MTCH1Q9NZJ7 389 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CBY1Q9Y3M2 126 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 DEFB131BA0A096LNP1 70 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 C2orf70A6NJV1 201 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 H3BUA1 57 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF701M0R085 212 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-217ENST00000487825 CTDSPLO15194 276 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 NBR2O15453 112 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 NDUFA3O95167 84 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 NRASP01111 189 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 OXTP01178 125 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 IGLV3-1P01715 115 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 SCTP09683 121 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 RRM2P31350 389 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 IFNA8P32881 189 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ASIPP42127 132 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF137PP52743 207 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 SSTP61278 116 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TRAM2Q15035 370 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ZSCAN26Q16670 478 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 PAGE3Q5JUK9 113 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 SPIN3Q5JUX0 258 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TMEM42Q69YG0 159 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TBPL2Q6SJ96 375 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 UNQ5815/PRO19632Q6UWF5 114 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 DHRS11Q6UWP2 260 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TMUB2Q71RG4 321 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TRMT10CQ7L0Y3 403 aaKnown RBP3.13□□□□□ -1.91
BRCA1-217ENST00000487825 TRPM8Q7Z2W7 1104 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 AQP12AQ8IXF9 295 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ENTHD1Q8IYW4 607 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 LINC00311Q8N616 119 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 FAM86B1Q8N7N1 296 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 PROKR2Q8NFJ6 384 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 DEFB104AQ8WTQ1 72 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 MCUR1Q96AQ8 359 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 CYYR1Q96J86 154 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 ATG101Q9BSB4 218 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 SCRT1Q9BWW7 348 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 RNF167Q9H6Y7 350 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 MOB1AQ9H8S9 216 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 CALYQ9NYX4 217 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 MBD2Q9UBB5 411 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
BRCA1-217ENST00000487825 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 A0A0U1RQV5 110 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 NBDYA0A0U1RRE5 68 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 K7EQG2 157 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 SIRPB1O00241 398 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF593O00488 134 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 FFAR1O14842 300 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ENTPD6O75354 484 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OR2H2O95918 312 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 SRMP19623 302 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 IL3RAP26951 378 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 PRDX6P30041 224 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 HTR1FP30939 366 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 GLP1RP43220 463 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OMPP47874 163 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 NPBWR1P48145 328 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 SLC18A1P54219 525 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 B2MP61769 119 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 RIPPLY1Q0D2K3 151 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 CYLC2Q14093 348 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 LTC4SQ16873 150 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 Q1RN00 199 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF829Q3KNS6 432 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF57Q68EA5 555 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 PPP1R27Q86WC6 154 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 Q8IYB0 196 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 C8orf31Q8N9H6 132 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 LFNGQ8NES3 379 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 NPBQ8NG41 125 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OR10A7Q8NGE5 316 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OR51L1Q8NGJ5 315 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OR2T4Q8NH00 348 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 OR4A5Q8NH83 315 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 CACNG8Q8WXS5 425 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 FCGR1BQ92637 280 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 GALNT14Q96FL9 552 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 RDH12Q96NR8 316 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 AMELYQ99218 206 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 ALKBH7Q9BT30 221 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 FAM103A1Q9BTL3 118 aaKnown RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 MED4Q9NPJ6 270 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms