RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 TMBIM6P55061 237 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 TAS2R31P59538 309 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 DGCR2P98153 550 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 SPCS2Q15005 226 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 C10orf55Q5SWW7 151 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 OR6F1Q8NGZ6 308 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 OR4A5Q8NH83 315 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 COA4Q9NYJ1 87 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
HDAC8-218ENST00000486704 C13orf42A0A1B0GVH6 325 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 OVOL1O14753 267 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 MPPED1O15442 326 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 HPRT1P00492 218 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 HLA-DMAP28067 261 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 SLURP1P55000 103 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 CLVS1Q8IUQ0 354 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-218ENST00000486704 OR51H1Q8NH63 302 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 C15orf40Q8WUR7 153 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-218ENST00000486704 USMG5Q96IX5 58 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 EXTL2Q9UBQ6 330 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
HDAC8-218ENST00000486704 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 ZNF735P0CB33 412 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 APELAP0DMC3 54 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 NQO2P16083 231 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 RPL27AP46776 148 aaKnown RBP12.29□□□□□ -0.44
HDAC8-218ENST00000486704 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
HDAC8-218ENST00000486704 RPL8P62917 257 aaKnown RBP12.29□□□□□ -0.44
HDAC8-218ENST00000486704 VAX1Q5SQQ9 334 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 OR4A47Q6IF82 309 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 SLC25A42Q86VD7 318 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 CMTM1Q8IZ96 169 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 TTC9CQ8N5M4 171 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 MIXL1Q9H2W2 232 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 CCDC59Q9P031 241 aaKnown RBP12.29□□□□□ -0.44
HDAC8-218ENST00000486704 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
HDAC8-218ENST00000486704 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 GPR31O00270 319 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 PGLYRP1O75594 196 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-218ENST00000486704 RLN1P04808 185 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-218ENST00000486704 TBPP20226 339 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 ZP3P21754 424 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 DCTN2Q13561 401 aaKnown RBP12.28□□□□□ -0.44
HDAC8-218ENST00000486704 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 SSX9Q7RTT3 188 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 RANGRFQ9HD47 186 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-218ENST00000486704 MTFP1Q9UDX5 166 aa12.28□□□□□ -0.44
HDAC8-218ENST00000486704 A0A1B0GW64 132 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
HDAC8-218ENST00000486704 S1PR2O95136 353 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 HLA-GP17693 338 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 F2RP25116 425 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 UCP3P55916 312 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 TSPAN5P62079 268 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 ZNF429Q86V71 674 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 LAX1Q8IWV1 398 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 CADM3Q8N126 398 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 OR52I2Q8NH67 350 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 RSRP1Q9BUV0 290 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.45
HDAC8-218ENST00000486704 KLK11Q9UBX7 282 aa12.27□□□□□ -0.45
HDAC8-218ENST00000486704 SORL1Q92673 2214 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 E7EUB6 86 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 S100GP29377 79 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 MRPS10P82664 201 aaKnown RBP12.26□□□□□ -0.45
HDAC8-218ENST00000486704 RHOGP84095 191 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 DEFA5Q01523 94 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 ZNF45Q02386 682 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 KLK9Q2XQG4 91 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 SLC38A6Q8IZM9 456 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 DGCR14Q96DF8 476 aaKnown RBP12.26□□□□□ -0.45
HDAC8-218ENST00000486704 ABHD1Q96SE0 405 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 AKIP1Q9NQ31 210 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 KLK9Q9UKQ9 250 aa12.26□□□□□ -0.45
HDAC8-218ENST00000486704 HMX3A6NHT5 357 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 MARCH11A6NNE9 402 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 UPK2O00526 184 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 RGS5O15539 181 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 NOL3O60936 208 aaKnown RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 CRYGCP07315 174 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 ERVK-16P61578 105 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 SSBP1Q04837 148 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms