RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 AARDQ4LEZ3 155 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 AUP1Q9Y679 476 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 CR1P17927 2039 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 LOC105371242A0A075B767 164 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 IGHV2-26A0A0B4J1V2 119 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 SSX9Q7RTT3 188 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 OR5AN1Q8NGI8 311 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 OR52E5Q8NH55 327 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 RNF141Q8WVD5 230 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 TMED6Q8WW62 240 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 BSCL2Q96G97 398 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 RHOVQ96L33 236 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 CLEC7AQ9BXN2 247 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 ARV1Q9H2C2 271 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 MED9Q9NWA0 146 aa11.85□□□□□ -0.51
POLR2J3-204ENST00000486319 TET2Q6N021 2002 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 C22orf46C9J442 243 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 M0R1W7 72 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 CST7O76096 145 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 FAM74A1Q5RGS3 127 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 ZNF429Q86V71 674 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 OR1S2Q8NGQ3 325 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 DTD1Q8TEA8 209 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 GINS3Q9BRX5 216 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 MRPL20Q9BYC9 149 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 WFDC1Q9HC57 220 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 ONECUT1Q9UBC0 465 aa11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 AMMECR1Q9Y4X0 333 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-204ENST00000486319 H3BP45 60 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 DFFBO76075 338 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 TGFAP01135 160 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 MC5RP33032 325 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 DYNLT3P51808 116 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 HBG1P69891 147 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 HBG2P69892 147 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 RELBQ01201 579 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 HLA-DRB5Q30154 266 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 PDLIM3Q53GG5 364 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 PDPNQ86YL7 162 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 PFDN2Q9UHV9 154 aa11.83□□□□□ -0.52
POLR2J3-204ENST00000486319 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 H0YJW9 148 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 H7C2Y5 167 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 FGF16O43320 207 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 CRLF1O75462 422 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 SCAF4O95104 1147 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 IFNA17P01571 189 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 IGHV2-5P01817 119 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 SEC11BP0C7V7 166 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 RAB13P51153 203 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 SPCS3P61009 180 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 CLINT1Q14677 625 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 TMEM177Q53S58 311 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 SPANXN5Q5MJ07 72 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 COMMD7Q86VX2 200 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 STPG2Q8N412 459 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 CLDND2Q8NHS1 167 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 CITED4Q96RK1 184 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 CLCC1Q96S66 551 aa11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-204ENST00000486319 C15orf61A6NNL5 157 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 LEUTXA8MZ59 168 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 SHOXO15266 292 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 REG1BP48304 166 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 OR2B8PP59922 312 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 LHX4Q969G2 390 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 ATP5SQ99766 215 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 WASHC3Q9Y3C0 194 aa11.81□□□□□ -0.52
POLR2J3-204ENST00000486319 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms