RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ZNF345Q14585 488 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 OR8H3Q8N146 312 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 OR4C13Q8NGP0 309 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 HARBI1Q96MB7 349 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 AQP10Q96PS8 301 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 MS4A7Q9GZW8 240 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 RBKSQ9H477 322 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 AUP1Q9Y679 476 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 ZANQ9Y493 2812 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IGHV3OR16-10A0A075B7F0 116 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IGHV1-69DA0A0B4J2H0 117 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 A0A0D9SG52 128 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 FAM24AA6NFZ4 105 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 C15orf61A6NNL5 157 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 OOSP1A8MZH6 123 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 NPFFO15130 113 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 SYNGR2O43760 224 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 SNAPC5O75971 98 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 VENTXO95231 258 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IGHV1-69P01742 117 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 CRYGBP07316 175 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 IAPPP10997 89 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 CNTFRP26992 372 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 CD1BP29016 333 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
HDAC6-226ENST00000483656 SAA4P35542 130 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 UBE2KP61086 200 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 SSX2Q16385 188 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 TMEM249Q2WGJ8 235 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-226ENST00000483656 KLF17Q5JT82 389 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-226ENST00000483656 RUSC1-AS1Q66K80 236 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 CLEC9AQ6UXN8 241 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 ZNF429Q86V71 674 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 OR4A16Q8NH70 328 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 TMEM167AQ8TBQ9 72 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 ARL6Q9H0F7 186 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 FOXA2Q9Y261 457 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-226ENST00000483656 CR1P17927 2039 aa8.11□□□□□ -1.11
HDAC6-226ENST00000483656 PRRC2AP48634 2157 aaKnown RBP8.11□□□□□ -1.11
HDAC6-226ENST00000483656 WRBO00258 174 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 GPR137BO60478 399 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 KBTBD11O94819 623 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 GATA3P23771 443 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 LGALS7P47929 136 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 LGALS4P56470 323 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 PSG5Q15238 335 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 SPINK9Q5DT21 86 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 OR2C3Q8N628 320 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 TMEM252Q8N6L7 170 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 INO80EQ8NBZ0 244 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-226ENST00000483656 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 MALSU1Q96EH3 234 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 FOXC2Q99958 501 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 AIFM2Q9BRQ8 373 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 CYTL1Q9NRR1 136 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 LYRM2Q9NU23 88 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-226ENST00000483656 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
HDAC6-226ENST00000483656 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-226ENST00000483656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.119e-8■■■□□ 18
HDAC6-226ENST00000483656 TET2Q6N021 2002 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 TEX50A0A1B0GTY4 177 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 BCL2L11O43521 198 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 SLC25A17O43808 307 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 TSC22D2O75157 780 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 MED6O75586 246 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 CFDP00746 253 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 TGFAP01135 160 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 PVALBP20472 110 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 CD24P25063 80 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 NUP62P37198 522 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 TAS2R30P59541 319 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 SPCS3P61009 180 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 HSPE1P61604 102 aaKnown RBP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 VAMP2P63027 116 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC6-226ENST00000483656 NHLH2Q02577 135 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 PJVKQ0ZLH3 352 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 EBI3Q14213 229 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 FAM120AOSQ5T036 256 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 GPR157Q5UAW9 335 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 CCDC144NLQ6NUI1 221 aa8.09□□□□□ -1.11
HDAC6-226ENST00000483656 THNSL2Q86YJ6 484 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms