RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLC35D1Q9NTN3 355 aa4.45□□□□□ -1.7
CSDE1-207ENST00000483407 SLC2A8Q9NY64 477 aa4.45□□□□□ -1.7
CSDE1-207ENST00000483407 COA4Q9NYJ1 87 aa4.45□□□□□ -1.7
CSDE1-207ENST00000483407 OR1A1Q9P1Q5 309 aa4.45□□□□□ -1.7
CSDE1-207ENST00000483407 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
CSDE1-207ENST00000483407 DYNC2H1Q8NCM8 4307 aaKnown RBP4.44□□□□□ -1.7
CSDE1-207ENST00000483407 TMEM14DPA8MWL7 114 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 RHODO00212 210 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 SCTP09683 121 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 SRMP19623 302 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 EDN2P20800 178 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 RANBP1P43487 201 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 SERPINB10P48595 397 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 CD81P60033 236 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 MRPS15P82914 257 aaKnown RBP4.44□□□□□ -1.7
CSDE1-207ENST00000483407 UNC119Q13432 240 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 VMA21Q3ZAQ7 101 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 HSD17B12Q53GQ0 312 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 C1orf100Q5SVJ3 147 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 AHSA2Q719I0 299 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 TBC1D26Q86UD7 250 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 LRRTM1Q86UE6 522 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 DHRSXQ8N5I4 330 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 OR6M1Q8NGM8 313 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 HARBI1Q96MB7 349 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 CMSS1Q9BQ75 279 aaKnown RBP4.44□□□□□ -1.7
CSDE1-207ENST00000483407 FAM110AQ9BQ89 295 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 NEURL2Q9BR09 285 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 HIPK2Q9H2X6 1198 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 PLEKHA3Q9HB20 300 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 RETNQ9HD89 108 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 Q9N2K0 584 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 C8orf4Q9NR00 106 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 RDH8Q9NYR8 311 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 AK3Q9UIJ7 227 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 DMRT1Q9Y5R6 373 aa4.44□□□□□ -1.7
CSDE1-207ENST00000483407 STARD9Q9P2P6 4700 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 IZUMO1RA6ND01 250 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 ERICH4A6NGS2 130 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 MSGN1A6NI15 193 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 FAM223BA6NKX1 122 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 SOCS1O15524 211 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 CREBL2O60519 120 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 IGLV2-23P01705 113 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 TRBV12-3P01733 135 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 CRYGBP07316 175 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 RRASP10301 218 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 ELLP55199 621 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 LINC00205P59089 165 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 QRFPP83859 136 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 RHOGP84095 191 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 DEFA5Q01523 94 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 ATP5G2Q06055 141 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 PJVKQ0ZLH3 352 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 TPBGQ13641 420 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 EXOSC2Q13868 293 aaKnown RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 INSL4Q14641 139 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 IRF3Q14653 427 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 TNXAQ16473 311 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 GUCA2BQ16661 112 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 RNLSQ5VYX0 342 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 FAM223AQ8IWN6 122 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 C8orf59Q8N0T1 100 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 PACRGLQ8N7B6 248 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 OR4A4PQ8NGN8 299 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 HDHD3Q9BSH5 251 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 MND1Q9BWT6 205 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 LPAR5Q9H1C0 372 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 OR2D2Q9H210 308 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 KCNK15Q9H427 330 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 SRD5A3Q9H8P0 318 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 PLGRKTQ9HBL7 147 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 PSORS1C1Q9UIG5 152 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 RBM7Q9Y580 266 aaKnown RBP4.43□□□□□ -1.7
CSDE1-207ENST00000483407 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
CSDE1-207ENST00000483407 A0A0A6YYD4 124 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 OR11H12B2RN74 326 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 BMPR1BO00238 502 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 SLC17A2O00624 439 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 BET1O15155 118 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 FABP7O15540 132 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 CD7P09564 240 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 CD3GP09693 182 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 UCHL1P09936 223 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 APELAP0DMC3 54 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 MAP2K4P45985 399 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 UBE2KP61086 200 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-207ENST00000483407 FHL2Q14192 279 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 DEFB114Q30KQ6 69 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 ZNF66Q6ZN08 573 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 SLC16A13Q7RTY0 426 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
CSDE1-207ENST00000483407 SLC25A42Q86VD7 318 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms