RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TEX45Q8NA69 505 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 VSTM2AQ8TAG5 236 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 TMUB1Q9BVT8 246 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 AKAP9Q99996 3911 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 MDFIC2A0A1B0GVS7 189 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 KBTBD11O94819 623 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 MPC2O95563 127 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 LY6G6DO95868 133 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 CRYGBP07316 175 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 NKX2-1P43699 371 aaPredicted RBP14.06□□□□□ -0.16
UPF3A-206ENST00000480362 OR2B8PP59922 312 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 ID3Q02535 119 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 MMDQ15546 238 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 LRRC75BQ2VPJ9 315 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 FOXRED2Q8IWF2 684 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 NPBQ8NG41 125 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 OR4A5Q8NH83 315 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 PIFOQ8TCI5 191 aa14.06□□□□□ -0.16
UPF3A-206ENST00000480362 QTRT1Q9BXR0 403 aaKnown RBP14.06□□□□□ -0.16
UPF3A-206ENST00000480362 LSM5Q9Y4Y9 91 aaKnown RBP14.06□□□□□ -0.16
UPF3A-206ENST00000480362 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-206ENST00000480362 TRAV14DV4A0A0A6YYC5 116 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 G3V3Q6 166 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 RRHO14718 337 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 NBR2O15453 112 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 ST8SIA3O43173 380 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 SPDEFO95238 335 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 S100A10P60903 97 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 FGL1Q08830 312 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 FBXL15Q9H469 300 aa14.05□□□□□ -0.16
UPF3A-206ENST00000480362 METTL1Q9UBP6 276 aaKnown RBP14.05□□□□□ -0.16
UPF3A-206ENST00000480362 C15orf61A6NNL5 157 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 K7EPK0 472 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 C1QBP02746 253 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 FOSL1P15407 271 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 SRP14P37108 136 aaKnown RBP14.04□□□□□ -0.16
UPF3A-206ENST00000480362 POLR2GP62487 172 aaKnown RBP eCLIP14.04□□□□□ -0.16
UPF3A-206ENST00000480362 AANATQ16613 207 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 FAM71E2Q8N5Q1 922 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 PPP1R14BQ96C90 147 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 TPSG1Q9NRR2 321 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 PLSCR3Q9NRY6 295 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 ZFP57Q9NU63 452 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 KIAA1456Q9P272 454 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 PRNDQ9UKY0 176 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 FOXA2Q9Y261 457 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-206ENST00000480362 SIGLEC9Q9Y336 463 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 POMT1Q9Y6A1 747 aa14.04□□□□□ -0.16
UPF3A-206ENST00000480362 NCBP2LA6PVI3 153 aaKnown RBP14.03□□□□□ -0.16
UPF3A-206ENST00000480362 FAM90A26D6RGX4 464 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 H0YIZ8 118 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 H3BUX3 64 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 BOLA2-SMG1P6H3BVE0 249 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 NDUFA3O95167 84 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 RLN2P04090 185 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 HNRNPCP07910 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
UPF3A-206ENST00000480362 MYOD1P15172 320 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 HNF1AP20823 631 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 RPL8P62917 257 aaKnown RBP14.03□□□□□ -0.16
UPF3A-206ENST00000480362 PJVKQ0ZLH3 352 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 PLGLAQ15195 96 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 MRGPRG-AS1Q2M3A8 158 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 AARDQ4LEZ3 155 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 C11orf87Q6NUJ2 197 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 ZNF429Q86V71 674 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 THAP6Q8TBB0 222 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 CLCC1Q96S66 551 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 RNF126Q9BV68 326 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 ZNF430Q9H8G1 570 aaPredicted RBP14.03□□□□□ -0.16
UPF3A-206ENST00000480362 TMEM14BQ9NUH8 114 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 TMEM160Q9NX00 188 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 C1RLQ9NZP8 487 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 HSPB7Q9UBY9 170 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 RCL1Q9Y2P8 373 aaKnown RBP14.03□□□□□ -0.16
UPF3A-206ENST00000480362 OR51B2Q9Y5P1 312 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
UPF3A-206ENST00000480362 WRBO00258 174 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 IFNA17P01571 189 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 TNFRSF9Q07011 255 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 PRSS8Q16651 343 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 PRSS54Q6PEW0 395 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 NOXA1Q86UR1 476 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 PPP1R27Q86WC6 154 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 MMD2Q8IY49 270 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 OR11H4Q8NGC9 324 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 OR8H1Q8NGG4 311 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 OR52E5Q8NH55 327 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 ZNF48Q96MX3 618 aaPredicted RBP14.02□□□□□ -0.17
UPF3A-206ENST00000480362 RBKSQ9H477 322 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 FKBP11Q9NYL4 201 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 MYO9AB2RTY4 2548 aa14.02□□□□□ -0.17
UPF3A-206ENST00000480362 TEX50A0A1B0GTY4 177 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 A6NDX4 124 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 FCN1O00602 326 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 SYNGR2O43760 224 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms