RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 OR51A4Q8NGJ6 313 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 JOSD2Q8TAC2 188 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 RXFP2Q8WXD0 754 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 SRSF12Q8WXF0 261 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 DLX4Q92988 240 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 TMEM54Q969K7 222 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 SLAMF6Q96DU3 332 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 ADAT3Q96EY9 351 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 PGLYRP3Q96LB9 341 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 OR4C12Q96R67 309 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 NAA38Q9BRA0 125 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 GINS4Q9BRT9 223 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 PRADC1Q9BSG0 188 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 RTBDNQ9BSG5 229 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 TMEM59Q9BXS4 323 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 CHST6Q9GZX3 395 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 POLR2J3Q9H1A7 115 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 REEP1Q9H902 201 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 MEPEQ9NQ76 525 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 EXOSC3Q9NQT5 275 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 RPRMQ9NS64 109 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 RBM22Q9NW64 420 aaKnown RBP eCLIP1.9□□□□□ -2.11
XRN1-211ENST00000477237 ZNF586Q9NXT0 402 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 ANAPC11Q9NYG5 84 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 BET1LQ9NYM9 111 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 DNAJC27Q9NZQ0 273 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 COMMD9Q9P000 198 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 ZNF629Q9UEG4 869 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 SHPKQ9UHJ6 478 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 VAX2Q9UIW0 290 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 POMPQ9Y244 141 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 CYSLTR1Q9Y271 337 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 NSG2Q9Y328 171 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 MRPS16Q9Y3D3 137 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 YTHDF2Q9Y5A9 579 aaKnown RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 R4GN57 208 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 AHDC1Q5TGY3 1603 aaPredicted RBP1.9□□□□□ -2.11
XRN1-211ENST00000477237 EFCAB5A4FU69 1503 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 TECPR2O15040 1411 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 KDM3BQ7LBC6 1761 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 MROH2AA6NES4 1674 aa1.9□□□□□ -2.11
XRN1-211ENST00000477237 BAZ2AQ9UIF9 1905 aaKnown RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 SBF2Q86WG5 1849 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 C1orf167Q5SNV9 1468 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ARHGEF28Q8N1W1 1705 aaKnown RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 A0A087WWV3 80 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 A0A0U1RQV1 116 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 LOC107984640A0A0U1RRK4 108 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IGLC7A0M8Q6 106 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 C7orf71A4D174 169 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 NCBP2LA6PVI3 153 aaKnown RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 CD300LBA8K4G0 201 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF850A8MQ14 1090 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SMKR1H3BMG3 65 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TAX1BP3O14907 124 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 NPFFO15130 113 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TRAF3IP2O43734 574 aaPredicted RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BKO60814 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 NPIPB7O75200 414 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SIX6O95475 246 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SLC2A10O95528 541 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IGKV1D-16P01601 117 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IGHMP01871 453 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IGKV5-2P06315 115 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BJP06899 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IL3P08700 152 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SLC35G6P0C7Q6 338 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 LAMP1P11279 417 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CPMP14384 443 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CXCL2P19875 107 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CXCL3P19876 107 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 NFYBP25208 207 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TSPOP30536 169 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ARL2P36404 184 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 KIR2DS2P43631 304 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MARCKSL1P49006 195 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF83P51522 516 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 GPM6AP51674 278 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SLC18A1P54219 525 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 APOC4P55056 127 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 YPEL3P61236 119 aaPredicted RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 RND3P61587 244 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SLC35A1P78382 337 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CX3CL1P78423 397 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SP4Q02446 784 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF92Q03936 586 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 KLRD1Q13241 179 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 PMAIP1Q13794 54 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF146Q15072 292 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HMGN3Q15651 99 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF141Q15928 474 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TMEM183BQ1AE95 376 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CEACAM16Q2WEN9 425 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SPANXN3Q5MJ09 141 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms