RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 FAM236CP0DP71 79 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 FGF6P10767 208 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 MYL12AP19105 171 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 CDK2P24941 298 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 OR10J1P30954 320 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 OMPP47874 163 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 OR1E2P47887 323 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 MARCKSL1P49006 195 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 RAP1GDS1P52306 607 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 SPCS3P61009 180 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 BTN3A2P78410 334 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 PMAIP1Q13794 54 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 OR8G1Q15617 311 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 GUK1Q16774 197 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 ACSBG2Q5FVE4 666 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 FAM201AQ5SY85 155 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 N4BP2L1Q5TBK1 243 aaPredicted RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 DHRS4L2Q6PKH6 230 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 SBSNQ6UWP8 590 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 LYZL2Q7Z4W2 148 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 UMODL1-AS1Q8N2C9 162 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 PACRGLQ8N7B6 248 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 UBL4BQ8N7F7 174 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 CCDC112Q8NEF3 446 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 OR4X1Q8NH49 305 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 MFSD8Q8NHS3 518 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 SGMS2Q8NHU3 365 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 CD200R1Q8TD46 325 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 AP3S1Q92572 193 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 DIRAS2Q96HU8 199 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 EBNA1BP2Q99848 306 aaKnown RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 PRRT1Q99946 306 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 TMEM109Q9BVC6 243 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 MED28Q9H204 178 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 VCX3BQ9H321 246 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 GLTPQ9NZD2 209 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 MRPL27Q9P0M9 148 aaKnown RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 ATPIF1Q9UII2 106 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 FBXO5Q9UKT4 447 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 TROQ12816 1431 aaPredicted RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 FMN1Q68DA7 1419 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 SUPT6HQ7KZ85 1726 aaKnown RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 MYO9BQ13459 2157 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 DENND4BO75064 1496 aaPredicted RBP1.11□□□□□ -2.23
SSB-210ENST00000474273 WDR7Q9Y4E6 1490 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 KDM6BO15054 1643 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 ARHGAP32A7KAX9 2087 aa1.11□□□□□ -2.23
SSB-210ENST00000474273 PPRC1Q5VV67 1664 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 MAPKBP1O60336 1514 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 ARHGAP5Q13017 1502 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 MAGI3Q5TCQ9 1506 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.1□□□□□ -2.23
SSB-210ENST00000474273 ARHGEF12Q9NZN5 1544 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 ROBO3Q96MS0 1386 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 DSCAMO60469 2012 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 GLI2P10070 1586 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 DIP2BQ9P265 1576 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 PIK3C2GO75747 1445 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 CASKIN1Q8WXD9 1431 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 C5orf49A4QMS7 147 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 FAM159BA6NKW6 160 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 OR5K4A6NMS3 321 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 A8MUN3 132 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 B4DEV8 164 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 PGRMC1O00264 195 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 KLRC4O43908 158 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 STK16O75716 305 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 OR4E1P0C645 316 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 HIST1H1TP22492 207 aaPredicted RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 CRABP2P29373 138 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 DEFA1P59665 94 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 GABARAPL2P60520 117 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 RPS20P60866 119 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 FGF12P61328 243 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 MRPS25P82663 173 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 EBPQ15125 230 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 SS18Q15532 418 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 MAPK14Q16539 360 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 TMEM97Q5BJF2 176 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 HIST2H3PS2Q5TEC6 136 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 LPCAT3Q6P1A2 487 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 CCDC121Q6ZUS5 278 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 NATD1Q8N6N6 113 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 FER1L6-AS1Q8NA97 138 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 OR10P1Q8NGE3 313 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 OR2T27Q8NH04 317 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 OR51H1Q8NH63 302 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 LHFPL5Q8TAF8 219 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 NEK7Q8TDX7 302 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 GALMQ96C23 342 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 ANKRD36BP1Q96IX9 119 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 ERMAPQ96PL5 475 aaPredicted RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 C1QTNF6Q9BXI9 259 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 RNASE7Q9H1E1 156 aaKnown RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 DCSTAMPQ9H295 470 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 TUBA4BQ9H853 241 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 PAQR5Q9NXK6 330 aaPredicted RBP1.1□□□□□ -2.23
SSB-210ENST00000474273 CCL26Q9Y258 94 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 HSPE1-MOB4S4R3N1 261 aa1.1□□□□□ -2.23
SSB-210ENST00000474273 KMT2BQ9UMN6 2715 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms