RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 DRAM2Q6UX65 266 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF600Q6ZNG1 722 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IDO2Q6ZQW0 420 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 Q6ZR03 302 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 Q6ZS92 163 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PGAP1Q75T13 922 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TCF23Q7RTU1 214 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 P4HA3Q7Z4N8 544 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C6orf201Q7Z4U5 140 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TMED4Q7Z7H5 227 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LYG2Q86SG7 212 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LUZP2Q86TE4 346 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ANGPTL5Q86XS5 388 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CDH26Q8IXH8 852 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF100Q8IYN0 542 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SLC7A5P1Q8MH63 180 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FTMTQ8N4E7 242 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 BPIFB2Q8N4F0 458 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SPICQ8N5J4 248 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ASCC1Q8N9N2 400 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 WDR31Q8NA23 367 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNRF1Q8ND25 227 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SLC30A7Q8NEW0 376 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PXT1Q8NFP0 134 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR56B1Q8NGI3 324 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR52H1Q8NGJ2 320 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR51T1Q8NGJ9 327 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR1B1Q8NGR6 318 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR11L1Q8NGX0 322 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR2T35Q8NGX2 323 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR10R2Q8NGX6 335 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR6K3Q8NGY3 331 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR4K15Q8NH41 348 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR51F2Q8NH61 342 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LILRB4Q8NHJ6 448 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LHFPL5Q8TAF8 219 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 UBALD1Q8TB05 177 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SLC25A40Q8TBP6 338 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL30Q8TCC3 161 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MARCH1Q8TCQ1 289 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF431Q8TF32 576 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MITD1Q8WV92 249 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PP6455Q8WZ26 134 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HAS2Q92819 552 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 BCL2L2Q92843 193 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C10orf35Q96D05 121 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RAB3CQ96E17 227 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 BORCS8Q96FH0 119 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 S100A16Q96FQ6 103 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CXorf58Q96LI9 332 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IP6K3Q96PC2 410 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GPER1Q99527 375 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM246Q9BRR3 403 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ADAT1Q9BUB4 502 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CHIAQ9BZP6 476 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SELENOIQ9C0D9 397 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF436Q9C0F3 470 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PARP12Q9H0J9 701 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OPN3Q9H1Y3 402 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MED28Q9H204 178 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C11orf1Q9H5F2 150 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF665Q9H7R5 613 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM165Q9HC07 324 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MYOZ1Q9NP98 299 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FAM212BQ9NTI7 297 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DCAF16Q9NXF7 216 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RDH8Q9NYR8 311 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 STMN3Q9NZ72 180 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IL36GQ9NZH8 169 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 THYN1Q9P016 225 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 EMC3Q9P0I2 261 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 COPZ2Q9P299 210 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RABL2AQ9UBK7 228 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CKLFQ9UBR5 152 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4Q9UBX2 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 KCNN3Q9UGI6 736 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ATPIF1Q9UII2 106 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 AK3Q9UIJ7 227 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF222Q9UK12 451 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RAB22AQ9UL26 194 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FZR1Q9UM11 496 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ING4Q9UNL4 249 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RABL2BQ9UNT1 228 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 STARD10Q9Y365 291 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HSPB11Q9Y547 144 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 KMT2CQ8NEZ4 4911 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 COL6A5A8TX70 2615 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 FAT1Q14517 4588 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 COL7A1Q02388 2944 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV3OR15-7A0A075B7D8 119 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 FXYD6-FXYD2A0A087WZ82 144 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 TRBV6-7A0A0A0MS04 114 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 TRAV39A0A0B4J263 110 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 TRAV17A0A0B4J275 112 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1D-13A0A0B4J2D9 117 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 A0A0G2JRQ6 117 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 A0A0U1RQK1 487 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 A0A1B0GWJ7 208 aa1.05□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF320A2RRD8 509 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms