RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SHISA6Q6ZSJ9 500 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF611Q8N823 705 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 LRRC75AQ8NAA5 344 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 NRGNQ92686 78 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 PIGTQ969N2 578 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 ST6GALNAC6Q969X2 333 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 DAZAP1Q96EP5 407 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 VGLL1Q99990 258 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 TXNDC17Q9BRA2 123 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 ST6GALNAC5Q9BVH7 336 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF835Q9Y2P0 537 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 LINC00312Q9Y6C7 94 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 ANAPC1Q9H1A4 1944 aa4.28□□□□□ -1.72
TMEM39A-206ENST00000473684 COL4A2P08572 1712 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A0A6YYD5 115 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1B0GWA3 101 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 GLOD5A6NK44 160 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 M0R2Z0 102 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 NDUFS4O43181 175 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM50AO95807 157 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SP9P0CG40 484 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 NUMA1Q14980 2115 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 RPEL1Q2QD12 228 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 GLIPR1L1Q6UWM5 242 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 DHRS13Q6UX07 377 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 CPEB2Q7Z5Q1 589 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ODF3L1Q8IXM7 274 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TDHQ8IZJ6 230 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TPRX1Q8N7U7 411 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM54Q969K7 222 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZC2HC1AQ96GY0 325 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM59Q9BXS4 323 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 MED29Q9NX70 200 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A0A6YYD4 124 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 PIGBOS1A0A0B4J2F0 54 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 LOC107986453A0A1B0GWG9 222 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 A1L4Q6 167 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 LRRC30A6NM36 301 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF878C9JN71 531 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SOCS1O15524 211 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 RENP00797 406 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 APOA2P02652 100 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 PEBP1P30086 187 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM50BP56557 158 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 NTHL1P78549 312 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ITPRIPL2Q3MIP1 535 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SP6Q3SY56 376 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM19A2Q8N3H0 131 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM251Q8N6I4 163 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF740Q8NDX6 193 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF502Q8TBZ5 544 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SPATA33Q96N06 139 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 RTN4RQ9BZR6 473 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM133Q9H2Q1 129 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 VSIRQ9H7M9 311 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SCN10AQ9Y5Y9 1956 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 DOCK9Q9BZ29 2069 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SHISA7A6NL88 538 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 C11orf94C9JXX5 98 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 RER1O15258 196 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 PHF1O43189 567 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ANGPTL7O43827 346 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 C1orf105O95561 183 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SRIP30626 198 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 OR3A4PP47883 348 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 CCL15Q16663 113 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZFAND6Q6FIF0 208 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 DGAT2L7PQ6IED9 249 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF841Q6ZN19 808 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM25Q86YD3 366 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 GATSQ8NAP1 163 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 OR5D13Q8NGL4 314 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 OR4C3Q8NH37 302 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ATP6V0E2Q8NHE4 81 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 LMX1AQ8TE12 382 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 ARHGAP5-AS1Q96IT6 56 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM126AQ9H061 195 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 NXF5Q9H1B4 397 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 SH2D2AQ9NP31 389 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 LY96Q9Y6Y9 160 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 R4GMQ9 66 aa4.27□□□□□ -1.73
TMEM39A-206ENST00000473684 KIAA2026Q5HYC2 2103 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 ARID1AO14497 2285 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 DOCK3Q8IZD9 2030 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 UTS2O95399 124 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CT45A6P0DMU7 189 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CT45A5P0DMU8 189 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CT45A10P0DMU9 189 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms