RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SPIN2AQ99865 258 aa10.02□□□□□ -0.81
SHROOM3-204ENST00000473602 SPIN2BQ9BPZ2 258 aa10.02□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF430Q9H8G1 570 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
SHROOM3-204ENST00000473602 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 LINC01619G3V211 115 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 MPPED1O15442 326 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 TNFSF12O43508 249 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 RAMP3O60896 148 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 PMP2P02689 132 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 HRH1P35367 487 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 MAS1LP35410 378 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 TMBIM6P55061 237 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 BRWD1-AS2P59051 145 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF818PQ6ZRF7 136 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 SNX29P2Q8IUI4 249 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 LYSMD2Q8IV50 215 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 SPAG16Q8N0X2 631 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 OR5T1Q8NG75 326 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 TMEM167AQ8TBQ9 72 aa10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 TINAGL1Q9GZM7 467 aaPredicted RBP10.01□□□□□ -0.81
SHROOM3-204ENST00000473602 C13orf42A0A1B0GVH6 325 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 SEC14L6B5MCN3 397 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 HPRT1P00492 218 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
SHROOM3-204ENST00000473602 OR9G9P0C7N8 305 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 HLA-DMAP28067 261 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 GNRHRP30968 328 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 RPL5P46777 297 aaKnown RBP10□□□□□ -0.81
SHROOM3-204ENST00000473602 TAS2R31P59538 309 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 DGCR2P98153 550 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 POU2AF1Q16633 256 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 SLC25A42Q86VD7 318 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 CMTM1Q8IZ96 169 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 VKORC1L1Q8N0U8 176 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 ADAD2Q8NCV1 583 aaKnown RBP10□□□□□ -0.81
SHROOM3-204ENST00000473602 OR4A5Q8NH83 315 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 USMG5Q96IX5 58 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 GPHA2Q96T91 129 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 PLEKHA2Q9HB19 425 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 COA4Q9NYJ1 87 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 BET1LQ9NYM9 111 aa10□□□□□ -0.81
SHROOM3-204ENST00000473602 IGHV4OR15-8A0A075B7B6 117 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 A0A087WW49 117 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 OVOL1O14753 267 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 FGF2P09038 288 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 NQO2P16083 231 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 TBPP20226 339 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 S100GP29377 79 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 TSPAN5P62079 268 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 CLVS1Q8IUQ0 354 aaPredicted RBP9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 OR51H1Q8NH63 302 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 ALX4Q9H161 411 aaPredicted RBP9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 COMMD9Q9P000 198 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 EXTL2Q9UBQ6 330 aa9.99□□□□□ -0.81
SHROOM3-204ENST00000473602 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 GPR31O00270 319 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 NOL3O60936 208 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 ZP3P21754 424 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 RPL8P62917 257 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 SPCS2Q15005 226 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 OR4A47Q6IF82 309 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 TTC9CQ8N5M4 171 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 DCUN1D4Q92564 292 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 DLX4Q92988 240 aaPredicted RBP9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 ASCL2Q99929 193 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 FXYD6Q9H0Q3 95 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 CCDC59Q9P031 241 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
SHROOM3-204ENST00000473602 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 RGS5O15539 181 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 PGLYRP1O75594 196 aaPredicted RBP9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 RLN1P04808 185 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF735P0CB33 412 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 APELAP0DMC3 54 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 HLA-GP17693 338 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 F2RP25116 425 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 SLURP1P55000 103 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 UCP3P55916 312 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 MRPS10P82664 201 aaKnown RBP9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 FAM209BQ5JX69 171 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 ZNF343Q6P1L6 599 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 SSX9Q7RTT3 188 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 CADM3Q8N126 398 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 HRASLSQ9HDD0 168 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 RABL2AQ9UBK7 228 aaPredicted RBP9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 MTFP1Q9UDX5 166 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 SCOCQ9UIL1 159 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms