RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 EPPINO95925 133 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 FBP1P09467 338 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 STAG3L3P0CL85 134 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ESDP10768 282 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 HLA-EP13747 358 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 CTSEP14091 401 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 SPNP16150 400 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 IDH3GP51553 393 aaPredicted RBP0.08□□□□□ -2.4
UBXN4-207ENST00000471246 GABARAPL2P60520 117 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 SLC35A2P78381 396 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 MAPK14Q16539 360 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 LRRC26Q2I0M4 334 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 HSP90B2PQ58FF3 399 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 PABPC1L2AQ5JQF8 200 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ACTL10Q5JWF8 245 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.08□□□□□ -2.4
UBXN4-207ENST00000471246 TMCO2Q7Z6W1 182 aaPredicted RBP0.08□□□□□ -2.4
UBXN4-207ENST00000471246 GID4Q8IVV7 300 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 DEFB124Q8NES8 71 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 OR4K17Q8NGC6 315 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 OR51L1Q8NGJ5 315 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 OR2AE1Q8NHA4 323 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 DEFB104AQ8WTQ1 72 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 FGF13Q92913 245 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF396Q96N95 335 aaPredicted RBP0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ODF3Q96PU9 254 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 SPRR2FQ96RM1 72 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 FAAP24Q9BTP7 215 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 MND1Q9BWT6 205 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 RGCCQ9H4X1 137 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 C11orf1Q9H5F2 150 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 C8orf4Q9NR00 106 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 RABL2BQ9UNT1 228 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 STK38LQ9Y2H1 464 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 FIS1Q9Y3D6 152 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ALG5Q9Y673 324 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ALPK3Q96L96 1907 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 LTN1O94822 1766 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 KDM3BQ7LBC6 1761 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 SCRIBQ14160 1630 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 NEO1Q92859 1461 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF532Q9HCE3 1301 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 SIPA1L1O43166 1804 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 MYO5BQ9ULV0 1848 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ARFGEF1Q9Y6D6 1849 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ANKRD30AQ9BXX3 1397 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 GREB1Q4ZG55 1949 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 SAMD9LQ8IVG5 1584 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 UACAQ9BZF9 1416 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 EXPH5Q8NEV8 1989 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 MDFIC2A0A1B0GVS7 189 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 GRIFINA4D1Z8 144 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 B4DEV8 164 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 C8orf87E5RJ46 101 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PSMD11O00231 422 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 UBFD1O14562 309 aaKnown RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 MRPS14O60783 128 aaKnown RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 LDOC1O95751 146 aaPredicted RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 IFNA14P01570 189 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PSMA1P25786 263 aaKnown RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 CCR7P32248 378 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PEX19P40855 299 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 DSTNP60981 165 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 GLO1Q04760 184 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 SPAG1Q07617 926 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PDK2Q15119 407 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 NNATQ16517 81 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 KRTAP20-2Q3LI61 65 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM155Q4W5P6 130 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 FAM162BQ5T6X4 162 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 HENMT1Q5T8I9 393 aaKnown RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 LAMTOR1Q6IAA8 161 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ZBTB8OSQ8IWT0 167 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 YIPF7Q8N8F6 280 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 C15orf53Q8NAA6 179 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 OR4A15Q8NGL6 344 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 OR4P4Q8NGL7 312 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 OR11L1Q8NGX0 322 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 OR5J2Q8NH18 312 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ANGPTL6Q8NI99 470 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 GALMQ96C23 342 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PPP1R14BQ96C90 147 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 BBS2Q9BXC9 721 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 MAP1LC3CQ9BXW4 147 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 HAUS4Q9H6D7 363 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 METTL17Q9H7H0 456 aaPredicted RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ANKHQ9HCJ1 492 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 KLK5Q9Y337 293 aaPredicted RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 C22orf24Q9Y442 160 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 FAM215AQ9Y5M1 114 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 SIP14410 1827 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 PHIPQ8WWQ0 1821 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 UHRF1BP1LA0JNW5 1464 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF142P52746 1687 aaPredicted RBP0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ITSN2Q9NZM3 1697 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 AGLP35573 1532 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 ARHGAP5Q13017 1502 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 LRRC37AA6NMS7 1700 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 QSER1Q2KHR3 1735 aa0.07□□□□□ -2.4
UBXN4-207ENST00000471246 KNDC1Q76NI1 1749 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms